Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00454 ATGTCGCCGGAATATGCCACCGAAGGAGTTTTTTCTACAAAGTCTGATGTGTACAGCTTTGGAGTGTTGTTACTTGAAATTGTTTGTGGAAGAAAAAACACGTGTTTTTATGATGATGAACGCCCATTAAATCTAGTTGGACATGTATGGGAATTGTGGAAAGATGGAAAGTGTTTGGAATTAGTGGATCCATCATTGGAGGAGTTATTAGATGGTGATGAAGTGCAGAGGTCATGTTGGTCTCTTGTGCGTTGA 255 0.4 MSPEYATEGVFSTKSDVYSFGVLLLEIVCGRKNTCFYDDERPLNLVGHVWELWKDGKCLELVDPSLEELLDGDEVQRSCWSLVR 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00454 84 Gene3D Transferase(Phosphotransferase) domain 1 1 84 - -
Spst11g00454 84 ProSiteProfiles Protein kinase domain profile. 1 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00454 84 SUPERFAMILY Protein kinase-like (PK-like) 1 67 IPR011009 -
Spst11g00454 84 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 80 - -
Spst11g00454 84 Pfam Protein tyrosine and serine/threonine kinase 1 51 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00454 Spst-Chr11 25331195 25331526 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00454 1 77 Receptor kinase-like Gene Family AT4G11480 61.538 7.94e-28 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00454 PK_Tyr_Ser-Thr 2.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00454 - - vun:114169229 139.043