Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00432 ATGGGATCCATTAGCAAGCAGCTTTTGTTGCTACTTTTTCCCATCATGGCAACCTGCGATCCTGCCACATCCACAAACCCCATCACAGAAAAATCAGACGCAGAAACAAACCATATACTTGGACTATACTTGGTGCATATGCGCATCGTGAACAATCTTTCTGACAACCAGCCTCTTAATGTTCATTGCAAATCCAAAGATGATGATCTGAACAATCATGTCATTTACAGGGGCCAAAGTTTCAGGTGGCGGTTCCGTCCTAATATCTGGGGCACAACGTTGTTCTTTTGCCATTTTTCATGGGCAGGAGGAGAAGGGAGCTATGATATCTATAAGAATAGGAGGGACTATGACAGATGCAAACATGCTTGTAACTGGTATGTCACTCAAGAAGGTATAGAAGGGTATACAGAAGAGGATAAACTCAACAAGAAGCCACCTAAGGTAGACATTTTTTTCAACTGGCAAAATCCATGA 477 0.4235 MGSISKQLLLLLFPIMATCDPATSTNPITEKSDAETNHILGLYLVHMRIVNNLSDNQPLNVHCKSKDDDLNNHVIYRGQSFRWRFRPNIWGTTLFFCHFSWAGGEGSYDIYKNRRDYDRCKHACNWYVTQEGIEGYTEEDKLNKKPPKVDIFFNWQNP 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00432 158 PANTHER - 46 133 IPR010264 -
Spst11g00432 158 SUPERFAMILY Cupredoxins 45 101 IPR008972 -
Spst11g00432 158 Pfam Plant self-incompatibility protein S1 46 155 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00432 Spst-Chr11 25034372 25034848 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00432 49 157 Carbohydrate Esterase AT3G16970 34.821 1.69e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00432 - - var:108339240 202.601