Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00416 ATGTTGATACTAGTTATTGGACTAGCTTCAGCTACTTTGTTAGTGATTGTTGCAGTTTATGTGTTGTATTGCAAGATGAGAGTGTCAAGATATGAGAGTAAGGACATTGAAAGCTCAGAACACAAGGAGGAGGAGGTGCCTCAGAAGGAGGATTTGATGATCTTTCAAGGTGGGGAGGACCTTACAATATGTGACATATTGGATGCTCCAGGGGAAGTGATTGGAAAATCCAACTATGGGACACTTTACAAGGCCTTGTTGCAGAGGAGCAACAAGGTGAGGCTGCTCAGGTTTCTGAGGCCAGTGTGCACTGCAAGAGGTGAAGATTTGGATGAGATAATTCAGTTTCTTGGAAGGGTAAGGCATCCTAACTTGGTTCCTCTTCTGGGGTTTTATACTGGGCCAAGGGGTGAGAAGCTTCTTGTTCATCCCTTCTATAGACATGGGAATCTCACTCAATTCATAAGAGATGGAAATGGAGAGTGTTACAAATGGTCCAACATATGTAGAATATCCATTGGTATAGTCAAAGGATTGGAGCATCTTCACACATCACAGGAGAAGCCTGTTATCCATGGAAACCTCAAGTCTAAAAACATCCTTTTGGACCGCTCCTACCAGCCGTACATCTCGGATTCCGGCCTACATCTTCTGCTGAATCCGACTGCTGGCCAAGAAATGCTTGAAAGTTCAGCAGCCCAGGGTTACAAGGCACCTGAGCTCATCAAAATGAAGGATGCTGGTGAGGAGAGTGATATATATAGCCTTGGTGTGATCATGCTGGAACTGCTTTCAGGAAAGGAACCTATCAATGAGCACCCTACTCCTGATGAGGATTTCTATTTGCCAAATTTCATGAGAAATGCAGTCCTTGGACACAGAATTGCTGATTTATACCACCCTGCCATTCTTCTCAGAAACAGCAGAAATGAGAGTATTCCAGTCACAGAAGAATGCATTTTCGAAGTTTTTCAACTTGCTATGGCTTGTTGCTCCCCTTCACCCTCAGTTAGACCTAACATAAAGCAAGTCCTCAAGAAACTTGAAGAAATTATGATCTAG 1062 0.435 MLILVIGLASATLLVIVAVYVLYCKMRVSRYESKDIESSEHKEEEVPQKEDLMIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTARGEDLDEIIQFLGRVRHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGECYKWSNICRISIGIVKGLEHLHTSQEKPVIHGNLKSKNILLDRSYQPYISDSGLHLLLNPTAGQEMLESSAAQGYKAPELIKMKDAGEESDIYSLGVIMLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRIADLYHPAILLRNSRNESIPVTEECIFEVFQLAMACCSPSPSVRPNIKQVLKKLEEIMI 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00416 353 ProSiteProfiles Protein kinase domain profile. 68 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00416 353 Gene3D Transferase(Phosphotransferase) domain 1 147 352 - -
Spst11g00416 353 SUPERFAMILY Protein kinase-like (PK-like) 71 351 IPR011009 -
Spst11g00416 353 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 29 351 - -
Spst11g00416 353 Pfam Protein tyrosine and serine/threonine kinase 72 348 IPR001245 GO:0004672|GO:0006468
Spst11g00416 353 Gene3D Phosphorylase Kinase; domain 1 68 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00416 Spst-Chr11 24801585 24803547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00416 35 351 Carbohydrate Esterase AT5G61570 60.615 8.00e-137 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst11g00416 PK_Tyr_Ser-Thr 2.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00416 - - gmx:100802295 661.759