Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00395 ATGATGGCTCCAAACACCTACTTCAACTGGGACGCTATTCAAATTTCAAACCTCTTCTATGAAGTCATGCAGGAAGAAATAACAACGCCAAACCTCCAACACCTTTTCTCCTACTCAGATGAAAGCTCTTTTCTTTCAAACGGGCTTTTCGAGCCGTACATACACCCTTCTTATGATTCCTTTGCTTCTCTTACTCGTCGTGACAGTTTTCCAATTCAAGAAGATTACCATCTTCCACCATGTCCCAAACGTCAAAAGTTATCCCATGAAAGAGAAATCCACTCCTCACTGCAAGACTTCACACAAACAGTGCTTCCATCCGATTACTTAGAGGGGTTTGCTGTGCCTTATGATACTTGTTATTCCTCGCAGACAGAGCAGCTGCAACAACACGTCTCCTCCTGTGAGTTTCCACCACAATGTGTGGATTTTCAGTTTGAGAAAACAGGAAATGAAAAAACCATATCTCGACAGAGCGTAGCAGCACGTGACAGAAGAAGAAAGATCACTGAGAAGACCCAAGAGCTTGGGAAGTTGGTTCCTAGAGGACCCAAGATGAACACAGGTGAGATGTTTCATGCAGCTGCAAAGTATGTGAAGTACCTTCAAGCACAAGTTGAAATGCTTGAACTCATGCACTCCCTCGAGAGAGATCTGGGCATTCGATTAGAGGAAGAGAATATGGAGAAGGAGAAAGCAGGAGTTGAAACGCTACGGGGTCTGGTTGTGTCTCCGTTTGTTGAAGAGATATACAGAGAGGAAAGCAGTGAAATTGGGGTTCATTCAACTGCTGCAAAGTGGTTCAATCTCTACGCAACGAAACTGCACGATGTTCAAAACCTTACTGACATAATTCATGGAACCAAGTTGCATCATGGTCATGACTGGCATCAGCATGAGGCCATCAAACTGTGGACTTTATACCATAGGTAA 933 0.4384 MMAPNTYFNWDAIQISNLFYEVMQEEITTPNLQHLFSYSDESSFLSNGLFEPYIHPSYDSFASLTRRDSFPIQEDYHLPPCPKRQKLSHEREIHSSLQDFTQTVLPSDYLEGFAVPYDTCYSSQTEQLQQHVSSCEFPPQCVDFQFEKTGNEKTISRQSVAARDRRRKITEKTQELGKLVPRGPKMNTGEMFHAAAKYVKYLQAQVEMLELMHSLERDLGIRLEEENMEKEKAGVETLRGLVVSPFVEEIYREESSEIGVHSTAAKWFNLYATKLHDVQNLTDIIHGTKLHHGHDWHQHEAIKLWTLYHR 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00395 310 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 157 218 IPR045843 GO:0003700|GO:0006355
Spst11g00395 310 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 212 IPR036638 GO:0046983
Spst11g00395 310 Pfam Pathogenesis-related protein Bet v 1 family 255 308 IPR000916 GO:0006952
Spst11g00395 310 Pfam Helix-loop-helix DNA-binding domain 161 203 IPR011598 GO:0046983
Spst11g00395 310 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 202 IPR011598 GO:0046983
Spst11g00395 310 SMART finulus 159 208 IPR011598 GO:0046983
Spst11g00395 310 Gene3D - 156 217 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00395 Spst-Chr11 23635900 23640430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00395 152 211 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 68.333 3.22e-17 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Spst11g00395 Bet_v_1 3.9e-09 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00395 - - gmx:102665938 251.136