Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00322 ATGAGTATCGGAGAAGAAGAAGGCAAAGGGAGCTCCAGGAAGCGTGGGCGTGAGCCGGAAAGTGCATTCCGGGGAGTGCGCAAACGCAGCTGGGGACGCTACGTCTCGGAAATACGGTTGCCGGGCCAGAAAACCCGGATATGGCTGGGCTCATTCGGGTCCGCTGAGATGGCAGCGCGGGCTTATGACTCCGCCGCTTTTTTCTTGAAAGGAGCCTCTGCCAGCCTTAATTTCCCCGACCTCGTCCACTCCCTCCCTCGCCCTCTCTCCTCCTCCCGGAGAGACATACAATCCGCCGCCGCTGAAGCCGCTCTCCACCCTCCCTCCGCCAATACCGTACCGGAGATCGATCGGTGGTGGGACCATTTGGGAGACGAATCCAGCATTTCGGCGACGTCGTTTGAGGATGTGAAGGAAGCCCCTCTGATGAGCCCCTTGAGGGTGGACTCCACTTTTGGAGATTTCTCATGGAATCAGCTCTTTGATTTCAACCATGATGACATTCTCAACATCCCCTCTTCTCTCTAA 528 0.5701 MSIGEEEGKGSSRKRGREPESAFRGVRKRSWGRYVSEIRLPGQKTRIWLGSFGSAEMAARAYDSAAFFLKGASASLNFPDLVHSLPRPLSSSRRDIQSAAAEAALHPPSANTVPEIDRWWDHLGDESSISATSFEDVKEAPLMSPLRVDSTFGDFSWNQLFDFNHDDILNIPSSL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00322 175 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Spst11g00322 175 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Spst11g00322 175 CDD AP2 21 81 IPR001471 GO:0003700|GO:0006355
Spst11g00322 175 Gene3D AP2/ERF domain 22 80 IPR036955 GO:0003700|GO:0006355
Spst11g00322 175 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Spst11g00322 175 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 124 - -
Spst11g00322 175 FunFam Ethylene-responsive transcription factor 2 21 80 - -
Spst11g00322 175 MobiDBLite consensus disorder prediction 1 25 - -
Spst11g00322 175 SUPERFAMILY DNA-binding domain 21 80 IPR016177 GO:0003677
Spst11g00322 175 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Spst11g00322 175 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00322 Spst-Chr11 11171604 11172131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00322 5 104 AP2-EREBP Transcription Factor Family AT5G25810 62.000 1.71e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst11g00322 AP2 3.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00322 K09286 - gmx:100783790 217.238