Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00314 ATGGCCAAGAGTCCCTGTCTCTTAAACTTTTTCCAGTTCTTGGCAATGCTCTTTCTCACCTCCTACTCTATTTTCCCGCCTTGTGAGTCTCTGACGTTGGAAACCCAAGCTCTTCTTCAGTTCAGGAACCATTTGAAGGACTCCTTGAATTCTTTAGCTTCCTGGAATGAATCAGACTCTCCATGTGAGTTTTATGGAATTACATGTGATCTAGTTTCTGGGAGAGTCACAGAAATCTCACTGGACAATAAGTCCCTCTCTGGTGTCATTTTCCCATCACTCTCAGTTTTACAGAGCCTGCAAGTTCTCTCACTACCATCCAATTTAATTTCCGAAAAGCTTCCATCAGATATAAGCAGGTGGACCAGCCTCAGAGTGTTGAATCTAACAGGAAATAAATTGGTTGGAGCAATCCCAGACTTGTCTGGGCTAAGAAACCTGCAAATTCTTGACCTTTCAGCAAACTACTTTTCTGGCAGCATCCCCAGCTGGTTGGGGAATCTAACTGGACTGGTTTCACTGTGTCTTGGGGAAAATGAATACAATGAAGGTGAGATTCCAGGGAATCTTGGAAACCTGAAGAACTTGACCTGGCTCTATCTTGGGGGCTCCCGTTTGATAGGAGAGATTCCAGAATCACTGTATGAATTGAAGGCATTAGAGATACTGGATATGTCAAGAAACAAGATCTCTGGAAGACTCTCCGGATCAATTTCCAAGTTACATAATCTTAACAAGATTGAGCTCTTCTCAAATAATTTGACAGGAGAGGTTCCAGCAGAGCTTGCAAACCTCACCAATCTGCAGGAGATTGACCTTTCTGTAAACAACATGTATGGTAGGTTGCCAGAGGAAATTGGGCACATGAAGAACTTGGTTGTTTTTCAATTATATGAAAACAGATTTTCCGGAGAACTTCCTGCAGGATTTGCGGATATGCGCCATCTCATTGGGTTCTCAATATATAGAAACAACTTCACCGGAACGATTCCAGAAAATTTTGGCCGGTTTTCACCACTTGAAAGTATTGACATATCTGAGAATCAATTTTCAGGCGATTTCCCGAAGTTCTTGTGTGAAAGAAGTAAGTTGAGGTTTTTGCTTGCATTACAAAACAATTTCTCAGGGACTTTTCCGGAGTCTTATGTAACATGTAAATCTCTGGAGAGATTTAGGATCAGTATGAACCAGTTATCTGGGAAAATTCCAGATGAGGTTTGGGCACTTCCCTACGTAAAAATAATTGACTTGGCCTATAATGATTTCAGTGGTGTGGTTCCTTCTGAAATTGGATTGTCTACCAGCTTAAGTCAGATAGTTTTGACAAAGAACAGGTTTTCAGGTATGCTGCCCCCAGAGCTTGGCAAGCTGGTGAACTTGGAGAAGCTTTACTTGAGCAACAATAATTTCTCTGGTGAAATACCTCCTGAAATTGGATCTCTGAAACAGTTATCCTCTTTGCATCTAGAAGTGAATTCCTTAACTGGTTCAATACCAGCAGAAGTGGGTCATTGTGAAAGGCTGGTGGACTTGAATCTTGCTCGGAATTCTCTGTCTGGAAATATCCCTCAGTCAGTTTCACTTATGAGCTCATTGAACTCTCTTAACATATCTGGAAACAAGCTTACAGGTTCTATTCCAGATAATTTGGAAGCAATAAAGTTAAGCTCGGTGGATTTTTCTGAAAACCTGTTTTCTGGAAGAATTCCATCTGGTCTTTTTATTGTTGGAGGAGAGAAAGCTTTTCTTGGAAACAAGGGGCTGTGTGTTGAGGGAAACCTAAAACCATCCATGAATTCTGATTTGAAGATTTGTGCCAAAAATCATGGTCAGCCAAGGATCTCTGCTGATAAATTTGTCTTTCTCTTTCTCATTGCTTCAATTTTTGTTGTTATCTTAGCTGGGTTGCTGCTTTTGAGTTGTAGAAGCCTCAAGAATGGTGCAGAAAAAAACTTGCAACGTCAGAAGGAAGTATGTCAAAAATGGAAACTTGCATCTTTCCACCAAGTAGATATCGATGCCGATGAAATATGTAATCTGGATGAAGATAATTTGATAGGTAGTGGTGGTACAGGAAAGGTTTATCGAGTGGAGTTGCGAAAAAATAGAGCCATGGTGGCTGTCAAGCATCTAGGGAAAATAGATGGTGTGAAAATATTAGCTGCAGAGATGGAGATTTTGGGGAAAATTAGACATAGAAATATACTTAAACTCTATGCTTCTTTACTTAAAGGAGGATCCAATCTTTTAGTGTTTGAGTACATGCCAAATGGTAATCTTTTTCAAGCTCTTCACGGACAGATAAAAGATGGGAAGCCAGACTTGGATTGGAAACAGAGGTATAAAATTGCTCTGGGAGCTGCCAAAGGAATTGCTTACTTACACCATGACTGTAACCCGCCCATTATTCATAGGGATATAAAATCCAGCAACATTTTGCTTGACGAGGATTATGAGCCAAAAATTGCTGATTTTGGTATTGCAAGGTTTGTAGAAAAATCTGATAAGCAGTTGGGTTATAGCTGTCTAGCTGGCACACTTGGTTATATTGCTCCAGAACTTGCTTATGCCACTGATATCACTGAAAAGAGTGATGTTTATAGCTTTGGAGTGGTGCTGTTAGAATTAGTGTCTGGAAGAGAACCCATTGAAGAGGATTATGGAGAGGCGAAGGATATTGTTTATTGGGTTTTGACTCATCTGAATGACCGTGAAAGTATTGTCAACATTCTTGATGAAAGGGTGGCATCTGAGTGTGTTGAAGATATGATTAAAGTGTTGAAGATTGGCATTAAGTGCACCACTAAGCTTCCATCTGTGCGCCCCACCATGAGAGAGGTTGTTAAGATGCTAATTGATGCAGAACCTTGTGCATTGAAATCTCCAAAATCATGA 2895 0.4041 MAKSPCLLNFFQFLAMLFLTSYSIFPPCESLTLETQALLQFRNHLKDSLNSLASWNESDSPCEFYGITCDLVSGRVTEISLDNKSLSGVIFPSLSVLQSLQVLSLPSNLISEKLPSDISRWTSLRVLNLTGNKLVGAIPDLSGLRNLQILDLSANYFSGSIPSWLGNLTGLVSLCLGENEYNEGEIPGNLGNLKNLTWLYLGGSRLIGEIPESLYELKALEILDMSRNKISGRLSGSISKLHNLNKIELFSNNLTGEVPAELANLTNLQEIDLSVNNMYGRLPEEIGHMKNLVVFQLYENRFSGELPAGFADMRHLIGFSIYRNNFTGTIPENFGRFSPLESIDISENQFSGDFPKFLCERSKLRFLLALQNNFSGTFPESYVTCKSLERFRISMNQLSGKIPDEVWALPYVKIIDLAYNDFSGVVPSEIGLSTSLSQIVLTKNRFSGMLPPELGKLVNLEKLYLSNNNFSGEIPPEIGSLKQLSSLHLEVNSLTGSIPAEVGHCERLVDLNLARNSLSGNIPQSVSLMSSLNSLNISGNKLTGSIPDNLEAIKLSSVDFSENLFSGRIPSGLFIVGGEKAFLGNKGLCVEGNLKPSMNSDLKICAKNHGQPRISADKFVFLFLIASIFVVILAGLLLLSCRSLKNGAEKNLQRQKEVCQKWKLASFHQVDIDADEICNLDEDNLIGSGGTGKVYRVELRKNRAMVAVKHLGKIDGVKILAAEMEILGKIRHRNILKLYASLLKGGSNLLVFEYMPNGNLFQALHGQIKDGKPDLDWKQRYKIALGAAKGIAYLHHDCNPPIIHRDIKSSNILLDEDYEPKIADFGIARFVEKSDKQLGYSCLAGTLGYIAPELAYATDITEKSDVYSFGVVLLELVSGREPIEEDYGEAKDIVYWVLTHLNDRESIVNILDERVASECVEDMIKVLKIGIKCTTKLPSVRPTMREVVKMLIDAEPCALKSPKS 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00314 964 SMART LRR_typ_2 144 168 IPR003591 -
Spst11g00314 964 SMART LRR_typ_2 97 121 IPR003591 -
Spst11g00314 964 SMART LRR_typ_2 457 481 IPR003591 -
Spst11g00314 964 SMART LRR_typ_2 529 553 IPR003591 -
Spst11g00314 964 SMART LRR_typ_2 217 240 IPR003591 -
Spst11g00314 964 SMART LRR_typ_2 265 289 IPR003591 -
Spst11g00314 964 FunFam Leucine-rich receptor-like protein kinase family protein 670 754 - -
Spst11g00314 964 Pfam Leucine Rich Repeat 459 481 IPR001611 GO:0005515
Spst11g00314 964 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Spst11g00314 964 SUPERFAMILY RNI-like 247 571 - -
Spst11g00314 964 Gene3D Ribonuclease Inhibitor 182 241 IPR032675 -
Spst11g00314 964 Gene3D Ribonuclease Inhibitor 242 313 IPR032675 -
Spst11g00314 964 SMART serkin_6 680 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00314 964 ProSiteProfiles Protein kinase domain profile. 680 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00314 964 ProSiteProfiles Leucine-rich repeat profile. 123 145 IPR001611 GO:0005515
Spst11g00314 964 Gene3D Transferase(Phosphotransferase) domain 1 755 958 - -
Spst11g00314 964 SUPERFAMILY Protein kinase-like (PK-like) 677 951 IPR011009 -
Spst11g00314 964 Gene3D Ribonuclease Inhibitor 314 599 IPR032675 -
Spst11g00314 964 FunFam Receptor-like protein kinase HSL1 291 598 - -
Spst11g00314 964 Gene3D Phosphorylase Kinase; domain 1 643 754 - -
Spst11g00314 964 Gene3D Ribonuclease Inhibitor 31 181 IPR032675 -
Spst11g00314 964 ProSiteProfiles Leucine-rich repeat profile. 459 481 IPR001611 GO:0005515
Spst11g00314 964 Pfam Protein kinase domain 682 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00314 964 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 362 952 - -
Spst11g00314 964 ProSitePatterns Protein kinases ATP-binding region signature. 686 709 IPR017441 GO:0005524
Spst11g00314 964 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Spst11g00314 964 SUPERFAMILY L domain-like 31 304 - -
Spst11g00314 964 CDD STKc_IRAK 686 951 - -
Spst11g00314 964 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 755 964 - -
Spst11g00314 964 FunFam Probable inactive receptor kinase RLK902 31 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00314 Spst-Chr11 10953612 10956904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00314 1 961 Receptor kinase-like Gene Family AT1G72180 55.807 0.0 1020
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst11g00314 Pkinase 8.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00314 - - gmx:100789704 1670.21