Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00248 ATGGCTGCCATTGAAGAGCTTGCTGATTCAATGCGCAAACCCGTGCCGGATCCTAACTCTACGATCATTTTTGTCTCCATAACCCTGGGCCTCTTGTTACCACAGACGCAGAATAGAGATGGGAGATTGAGTTCCAATTTTGATATGAAGGAAAATTTGATTCGGTATTCGGAGGAAATGATGGAGAATGGTTTGCGAAAATTTGGGTGGTCGGGGATGGTACAATGCATCCTTGTGTCGAGTGCAATGTACTTTGATGCACAGCAATCCTTCATGGCCATCTACTCTGACGACTACCCAACTTGGCACTGCACAGATCTCACCACATGCACTTCTCATTCCAATATCTGCAACATTCCAAAGTCATCTTGGGCATGGGATGGACCCTCTTCTAAGACAATCATATCAGAGTTTGACCTTGAATGTTCCAGCAGCTTCATCACCGGTTTACCCCAATCGTCTTTCTTCCTAGGTTGCTTTCTTGGTTCCTTTCTTCTTGCCAGCTTGGCTGACACATCTCTTGGAAGAAAGAACCTCCTTATTCTCTCCTGTTTCTGTATGTCCTTAGCTTCTATTATGATTGTTTTCTCAACCAATGTTTGGACCTACTCAGCTTTGAAGTTCCTCATTGCCTTTTCGCGTTCATCCGTTGGAACATGTGTTTTAGTGTTACTCACGGAGAAAGTGAGCACAGAGTGGAGGTTCACTGTGGGGATTGTTGAATATTTATGCTTTACTTTGGGGTATATGGCCTTGCCTGGAATAGCTTATTTAAACAGAAATTCCTCGTGGAAATCTCTTTATGTGTGGACGTCCGTTCCTGCTATTTGTTATTCTCTGTTTGCTCACCTTTTTGTTACTGAGTCTCCAAGGTGGCTTCTCATGCAAGGTCGAGAACAAGAAGCCATGGCAATGCTTACAGGAATTTCTAATTATTTAGTAGAAAATGATCCTAATTTGACTGCAAGCCTACTAAAAGTTCCTATTGTCAAACAAAATTCTTCAATTTTCCAACTGTACTCATCAATAGCAGAGTTGTTTGAGAGAAGTTGGGCTCTCAAACGGACGGTAGCAATTATGGTGCTTGGTCTTTGGGTTGGCATGGTGTATTTCGCCATGCCTTTGGCCGTGGGGAATTTGGGATTCGACATTTACTTGGCCGTTGTGTTTTATGCTTTCTTGGAAATACCCTCTTGTGTGGCCACATACTTCTTGGAAAACTACAGAAGAAAGCCATCTATTCTTGCATTCGCAGTAGCTAGTGGGATATGCTGCATATTGTGTGCGATCGTTGGCACTGGGCTGCAAGTGGCTAAGGTGGGGATATCATTGGTAGCATTTTTCAGTGTTGTCACGGCTTATAATGTGTTTCTCCTTTACATCATCGAGCTGTTTCCCACGAGTGTAAGGAACACCACCACCTCATTGGTGAGGCAAGCCGTTGTGTTTGGTAACATATTTAGCCCATTTTTTGTATCTGCGGGGAGGAAGAATGATATTTTCTCCTATGGCCTGTTTGGAGTGGTTATAATCTCGTCCTCTTTGGCTTTGCTCTGTTTGCCAGAGACCATAGGAATAGCTCTTTGTGATACCATGGATCAACAAGAGATTAAGGACAAGATATCTGCGCCAAATGTTTAA 1641 0.4327 MAAIEELADSMRKPVPDPNSTIIFVSITLGLLLPQTQNRDGRLSSNFDMKENLIRYSEEMMENGLRKFGWSGMVQCILVSSAMYFDAQQSFMAIYSDDYPTWHCTDLTTCTSHSNICNIPKSSWAWDGPSSKTIISEFDLECSSSFITGLPQSSFFLGCFLGSFLLASLADTSLGRKNLLILSCFCMSLASIMIVFSTNVWTYSALKFLIAFSRSSVGTCVLVLLTEKVSTEWRFTVGIVEYLCFTLGYMALPGIAYLNRNSSWKSLYVWTSVPAICYSLFAHLFVTESPRWLLMQGREQEAMAMLTGISNYLVENDPNLTASLLKVPIVKQNSSIFQLYSSIAELFERSWALKRTVAIMVLGLWVGMVYFAMPLAVGNLGFDIYLAVVFYAFLEIPSCVATYFLENYRRKPSILAFAVASGICCILCAIVGTGLQVAKVGISLVAFFSVVTAYNVFLLYIIELFPTSVRNTTTSLVRQAVVFGNIFSPFFVSAGRKNDIFSYGLFGVVIISSSLALLCLPETIGIALCDTMDQQEIKDKISAPNV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00248 546 SUPERFAMILY MFS general substrate transporter 133 526 IPR036259 -
Spst11g00248 546 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 71 533 - -
Spst11g00248 546 Gene3D MFS general substrate transporter like domains 122 533 IPR036259 -
Spst11g00248 546 ProSiteProfiles Major facilitator superfamily (MFS) profile. 76 524 IPR020846 GO:0022857
Spst11g00248 546 Pfam Sugar (and other) transporter 136 528 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00248 Spst-Chr11 8138931 8140826 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00248 43 538 Organic Solute Cotransporters AT1G16390 45.059 7.00e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00248 - - gmx:100819053 802.742