Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00247 ATGGAAGATTCGGTTAAAGATGCAACTAAGTCTGATTCTGTTCAGCAACAGAACATGATTATGTCACTAGATGAAATGATAGAGAGGGGTTTGGGAAACTTTGGGTGGACACAGTTCCTTCAAAGCATCCTTGTGTCAGTGGCAATGTACTTCGATGCACAGCAATTATTCATAGCAATCTACACTGATGATTACCCAACATGGCACTGCACCAACCACAGCACAACATGCACCTCACATTCTGACATCTGCAAGCTCCCAAAGTCATCTTGGGCTTGGGATGGACCTTCTTCTAAGACAATCATATCACAGTTTGGCCTTGAATGTGCCAGCAACTTCATCACAGGTTTACCCCAATCCTCTTTCTTCATTGGTTGCCTTCTTGGTTCCTTCCTCTTAGCCTCCTTGGCCGATTCATCTTTGGGAAGAAAGAACATGATCATTCTTTCTTGTTTATCAATGTCCATAATGTCACTCATCATCATCTTCTCCACCAACGTTTGGATCTACTCGGCCTTGAAATTCTTCATTGGGTTTTGTCGATCGTCAATTTCAACATGTTGCTTGGTGTTACTCACGGAGAAAGTGAGCACCAAGTGGAGGTTCACAGTGGGGATTATAGAGTTTTTCTTCTTCACATCAGGGTGCATGTTCTTGACGGGTGTAGCTTATGCCAACAGAAATTCGCCATGGAAATATCTTTACTTGTGGACTTCGGTTCCTGCTATTTCTTACTCTCTCATTGCTTACCTTTTTGTCACCGAGTCTCCAAGGTGGCTTCTCATGCAAGGTCGAGTGACAGAAGCAATGACAATGCTTAAAGGAGTTCCGGAAAATGTAGCAAATTTAACTGGAAACCTACCAAAAGAGCCTCCTAAACAATCGGCTTCACACCAACAAAGATTAAGTCTAGCAGAAGAAATTAGTGTTTCACCAACAGATATGTCCACAGTTGGTACTCTATCATGTACAGAACAGAGATATCTTGAAAGGAGAGAAAACCAAAAAGAAGGGGTTTCATTTTCTCAACTCTACTCATCAATAGCAATGTTGTTCAAAACAAGTTGGGCTACAAAACGAATGGTGTCAGTTATGGGGCTAGGTTTAGGCATTGGAATGGTGTATTTTGGCATGCCACTGGCAGTGGGAAACTTGGACTACAACATTTACCTCGCAGTTGTGTTCAATGCCTTGATGGAAATACTCTCTTGCGGGGTGATCTATTTCTTGGGAAACTGCTCAAGAAAGTTATCCATTCTTGCATTCTCACTAGGCAGTGGGATATGTAGCATAGTGTGCGTGGTCATACGCAGTGGACCACAAAGTGTTAAGGTGTGGCTGGCAGTGGCATCGTTTTTCTGTGCATGCACTGCTTTCAACGTGTTTCTCATATTCATCATAGAGCTGTTTCCGACATGCGTGAGGAACACTACAGCATCACTTGCGAGACAAGCTGTGATGTTTGGTTGCATTTTCAGCCCGTTTTTGATATCTGCGGGGAGGAAGAACGACCTTTTCTCTTATGGGGTGTTTGGAGTGGTTATAATTTGCTCCACTTTCACCCTGTTGGGTTTGCCAGAGACCAGAGGAATGGCTCTTTCTGATACCATGGATCAACAAGAGAAGAAGGAAACACCCCTCTGA 1644 0.4337 MEDSVKDATKSDSVQQQNMIMSLDEMIERGLGNFGWTQFLQSILVSVAMYFDAQQLFIAIYTDDYPTWHCTNHSTTCTSHSDICKLPKSSWAWDGPSSKTIISQFGLECASNFITGLPQSSFFIGCLLGSFLLASLADSSLGRKNMIILSCLSMSIMSLIIIFSTNVWIYSALKFFIGFCRSSISTCCLVLLTEKVSTKWRFTVGIIEFFFFTSGCMFLTGVAYANRNSPWKYLYLWTSVPAISYSLIAYLFVTESPRWLLMQGRVTEAMTMLKGVPENVANLTGNLPKEPPKQSASHQQRLSLAEEISVSPTDMSTVGTLSCTEQRYLERRENQKEGVSFSQLYSSIAMLFKTSWATKRMVSVMGLGLGIGMVYFGMPLAVGNLDYNIYLAVVFNALMEILSCGVIYFLGNCSRKLSILAFSLGSGICSIVCVVIRSGPQSVKVWLAVASFFCACTAFNVFLIFIIELFPTCVRNTTASLARQAVMFGCIFSPFLISAGRKNDLFSYGVFGVVIICSTFTLLGLPETRGMALSDTMDQQEKKETPL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00247 547 Pfam Sugar (and other) transporter 79 275 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst11g00247 547 SUPERFAMILY MFS general substrate transporter 100 535 IPR036259 -
Spst11g00247 547 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 35 538 - -
Spst11g00247 547 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 529 IPR020846 GO:0022857
Spst11g00247 547 Gene3D MFS general substrate transporter like domains 39 543 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00247 Spst-Chr11 8131929 8133572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00247 22 544 Organic Solute Cotransporters AT1G79360 44.234 2.62e-159 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00247 - - vun:114169041 785.793