Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00242 ATGGATGCCACTCACTCCATGTTCTGTAACAATGATCTGGTTAACCCCCTAAGCTCAATGGGCATGCAGGTGTCCTGCATTCTTGTTGTGTCACACGTCTTCAACGTTGTGTTTAGGACTGTGGGTCAACCTGGACCAATTGCACAAATTCTGGCTGGGTTGGCGCTAGGTCCAATGTCTCATATTGAGTATATAAAGGCTACATTCTTTCCTGCTAGTTCAATAAATTACTATGAAGTTGTGAGCTTCTTCTGTCGCATAAATTTCATGTTTTTGTTTGGGTTAGAGATGAATATGCACTACACATTGCGCAATCTGCGTAGGGTCAGCTTAGTAGCCTGTGGTGGTGCTCTAATGGGTGGTCTTTTTGGTCTATCTGTCTCATTTTACTTGCATCAAGAACTAAACACCATTGACAATGCCCCTTTGTATTATTTTTGCATGATCATCATGCTAGTGGTGTCATACACAAGCTCCCCTATGGTGATTCGTTTGTCAGCAGAGTTGAGGTTTGCAGCATCACACGTGGGGCGAATGGCGGTGTCGTCTGCATTGATCACAGAAATGGGGTGCTTGTTGTTCTTCAATGTGATGGTTAACTGGAGAAAACCAAATCAAATTTCTTCTGGTTTTGGTTGCATTATAATCACTGTCGCGGTGGTTTTCATAAACAGGCACTTAGCAGTCTGGTTAAACGCAAGACATAGAAACCAGAAGTACCTCAAGGCTCCTGAATTGTTACTCATTCTGTTTCTGCTTCTGACTTGCGCAATGATAATAGAAATTTGGGGTTACAACAGTATTATCAGTTGTTTCATCATTGGTTTGTTGTTCCCTAAGGAAGGGAAAACAGCTAGAACATTGCTGCACAAACTTGGTTATTCTATTTACAACTTTGTGCTTCCAGTATATTTTGGCTACTTAGGCTTGCAGTGTGACCTGATAAATGTCTTCAGGAGCTTGCAGCGTACGGCCAATATGGCCATATTGATATTATTGAGCATTGCAAGCAAGCTTGGTGGCACTCTTATGATTTGCCGCTACCTTAAAATTCCCACAAGTGAAGGAATTTTTCTTGGCTTCATATTGAACACTAGAGGCTATGCTGATCTTCTGTTCATTGGTGCAGCAGCCAAGCAAGTGATTACATTTGATTCAGACGCGTACAATGTTCTGTTGGTATCAATAGTACTTAACACAATAATATCAGGAGTAATTGTGGCTTTTCTAGTGAGAGGGGAAGACAAAATGTTTGCAAACAACCACACTGCAATTGAACCACAACAAATGGAAGATGAACTTCGAATTCTGGCATGTGTGTACGACCCTCGTCAGGTATCTGCCATACTTGCCACAGTACTAGCAATACATGGTTCCACATCATCACCATCTACCACTTTCTTAATGCACCTAATAGAGCTTGTGAAGAAGATCAAGTCCAACCTGTTATACCATGAGAAAGAAAATGCTGACCTTAGCGACGACGAGGACTATGGTGGCAATGATGTGGTGGAAATCAACAACTCCTTGGATACGTTCACTTCAGAAACAAAGATTCTAGTCCACCAAAGAAGGGCAGTGTCTTCTTTCCCATCCTTGTATGAAGATGTGTGCAATGAAGCAGAAGATCTCCAAGTGTCAATTGTGCTACTCCCCTTCCACAAGCACCAACGCATTGATGGGAAATTGGAAAGTGGAAAAGAGGGTATAAGGATCACGAATCAGAAGGTGCTAAGACATGCCCCTTGTTCAGTTGGTGTCATAGTAGAAAGAGGCCTTGCAAGGGTACCCGGCTTCTCACAACTAGTAGCATCTGAAGCCATACAAAATATTGCAACACTTTTCTTTGGTGGCCCCGATGACCGTGAGGCTATTGCATGGAGCCTACGCATTTCAGGAAGTCCACGTGTGAACTTGACAATCATAAGATTTTTGTTGAGTTCTTCATCACAGAATGAACAGATCGAGAGTGGACAATCTGAGGACAAAGAGATTTTGATGTCACTGTCTGGGGAGGAGACAGTGAATGAGATTGACAACACCTTCATGGTTGACTTCTACAACAGGTATGTGACTTCAGGCCATATAGGGTATGTGGAGAAGTTTGTGAAGAATGGAGCACAAACAGTGGATTCTTTGAAAGAGATAGGAGACATGTACTCTTTGTTTATAGTAGGAAAAGGTGGTAGAGGACAGAGTTCACTCACAATTGGTATGAGTGATTGGGAAGAGTGTCCGGAACTTGGTACAGTTGGTGATGTCTTGGCCTCTTCAGACTTTGATATTCATGGCTCAGTTTTGATTGTTCAACAACATAGAGATGCCAAGAAAGGCCTATTGCATGATTAG 2349 0.424 MDATHSMFCNNDLVNPLSSMGMQVSCILVVSHVFNVVFRTVGQPGPIAQILAGLALGPMSHIEYIKATFFPASSINYYEVVSFFCRINFMFLFGLEMNMHYTLRNLRRVSLVACGGALMGGLFGLSVSFYLHQELNTIDNAPLYYFCMIIMLVVSYTSSPMVIRLSAELRFAASHVGRMAVSSALITEMGCLLFFNVMVNWRKPNQISSGFGCIIITVAVVFINRHLAVWLNARHRNQKYLKAPELLLILFLLLTCAMIIEIWGYNSIISCFIIGLLFPKEGKTARTLLHKLGYSIYNFVLPVYFGYLGLQCDLINVFRSLQRTANMAILILLSIASKLGGTLMICRYLKIPTSEGIFLGFILNTRGYADLLFIGAAAKQVITFDSDAYNVLLVSIVLNTIISGVIVAFLVRGEDKMFANNHTAIEPQQMEDELRILACVYDPRQVSAILATVLAIHGSTSSPSTTFLMHLIELVKKIKSNLLYHEKENADLSDDEDYGGNDVVEINNSLDTFTSETKILVHQRRAVSSFPSLYEDVCNEAEDLQVSIVLLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSVGVIVERGLARVPGFSQLVASEAIQNIATLFFGGPDDREAIAWSLRISGSPRVNLTIIRFLLSSSSQNEQIESGQSEDKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGHIGYVEKFVKNGAQTVDSLKEIGDMYSLFIVGKGGRGQSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLIVQQHRDAKKGLLHD 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00242 782 PANTHER CATION/H + ANTIPORTER 10 773 - -
Spst11g00242 782 FunFam Cation/H(+) antiporter 1 19 420 - -
Spst11g00242 782 Pfam Sodium/hydrogen exchanger family 27 412 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst11g00242 782 Gene3D - 19 419 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00242 Spst-Chr11 7907901 7910669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00242 11 782 Antiporter Super Family AT1G79400 38.974 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00242 K26731 - gmx:100804522 1425.61