Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00240 ATGGTGAAAGCTATCAGAGTTCACCAACTCGGTGGCCCTCAGGTTTTGAAGTGGGAGGATGTGGAAATTGGAGAGCCAAAAGAAGGCGAGGTTCGTGTGAGGAACAAAGCTGTTGGGGTTAATTTCATTGATGTCTATTTTCGCACAGGAGTTTATAAAGTCCCCTCTTTACCCTACACTCCAGGTGTGGAGGGTGCTGGGGTGGTCACGGCTGTGGGTGTTGGAGTCACTGATATACAAGTTGGAGATACTGTAGCTTATTCATGTCAACCTCTGGGCTCATATGCTGAGGAGCACATTCTTCCTGCAAGAAATCTAGTACCCCTCCCTCCCACAATTGACCCCATTATTGGGGCATCCATCATGTCCAAGGGCATGACGACTCGTTATTTGCTTCAACAATGTTTCAAGGTTGAACCTGGTCACACAATTCTTGTACATGCAGCAGCTGGTGGAGTAGGATCCTTATTGTGCCAATGGGCAAATGCTCTTGGTGCAACCGTTATTGGAACTGTATCCAATAATTTGAAGGCAGCTCACGCCAAGGAGGATGGATGCCATCATGTAATATTATACACAGAAGATGATTTTGTTGCTCGTGTCAACGAAATTACATCAGGCAATGGAGTTGAAGTAGTCTATGATTCCGTGGGGAAAGATACATTTGAGGGATCTTTGGCTTGCTTGAAGCTTCGAGGTTACATGGTAAGTTTTGGGCAATCATCAGGTACACCTGATCCAGTTCCATTATCTTCCCTGGCTACAAAGTCCTTGTTCCTGACAAGACCTACCTTAAAGCATTACAATGTCACTCGGGATGAGCTATTGGAGGCTGCTGGAGAGTTGTTTTCCAAGGTTGCTTCTGGTGTCTTAAAGGTGCGGGTTAATGGGACTTATCCGTTGTCTGAGGCAGCAAGAGCACATGAAGACCTGGAGAATCGGAAGACTACAGGATCTGTTGTGTTGCTTCCCTAA 975 0.4615 MVKAIRVHQLGGPQVLKWEDVEIGEPKEGEVRVRNKAVGVNFIDVYFRTGVYKVPSLPYTPGVEGAGVVTAVGVGVTDIQVGDTVAYSCQPLGSYAEEHILPARNLVPLPPTIDPIIGASIMSKGMTTRYLLQQCFKVEPGHTILVHAAAGGVGSLLCQWANALGATVIGTVSNNLKAAHAKEDGCHHVILYTEDDFVARVNEITSGNGVEVVYDSVGKDTFEGSLACLKLRGYMVSFGQSSGTPDPVPLSSLATKSLFLTRPTLKHYNVTRDELLEAAGELFSKVASGVLKVRVNGTYPLSEAARAHEDLENRKTTGSVVLLP 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00240 324 SMART PKS_ER_names_mod 11 322 IPR020843 GO:0016491
Spst11g00240 324 CDD QOR2 3 324 IPR047618 -
Spst11g00240 324 Gene3D - 11 318 - -
Spst11g00240 324 Pfam Zinc-binding dehydrogenase 152 260 IPR013149 -
Spst11g00240 324 FunFam Quinone oxidoreductase 1 124 268 - -
Spst11g00240 324 SUPERFAMILY GroES-like 2 150 IPR011032 -
Spst11g00240 324 Gene3D - 124 268 - -
Spst11g00240 324 Pfam Alcohol dehydrogenase GroES-like domain 29 88 IPR013154 -
Spst11g00240 324 PANTHER QUINONE OXIDOREDUCTASE PIG3-RELATED 3 324 - -
Spst11g00240 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 114 274 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00240 Spst-Chr11 7891355 7898964 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00240 K00344 - gmx:100793768 538.11