Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00234 ATGGCTTCTGTGCAGATCCTGTGTGCATGCACTAGCAGTCAGGTTCAACACCAGGGTTCCATCAGATATAGATATGGACAACCCAATGAGAGGATCAATAAGAGAAGGTGTTCAGTTAGAGTTGAAGGGGGGAAGGGGATGGTTCTTCCCAATTTAGAGGAAGAGAAGAGGAATCTGAGAGTGTTGGTGGCTGGTGGGGGCATTGGTGGCCTTGTTTTGGCTCTAGCTGCAAAGCACAGAGGGTATGAAGTAAAGGTATTTGAGAAGGATTTGAGTTCTGTTAGAGGGGAAGGTAAGCACAGAGGTCCAATTCAACTCTTGAGCAGTGCCCTTGCTGTATTGGAAGCCATCGATCAGAGTGTTGCATGGCAGATAATGGAGGCTGGCTGTGTCACTGGCAATAGGACTAATGGCCTTGCTGATGGTCTATCTGGAGAGTGGTTCAGTATGTTTGATCTTTTGACTCCTGCTTCAAAGAAAAAGCTTCCTCTTACCCTAGTCATATGCAGGATGTCATTGCAAGATATATTGGTCAATGCAGTTGGTTCAAACATACTTAGAAACAAATGTAAAGTTGTAGATTTTATTCAGGAACCTAGCCAGGTTAGAGTGATCCTTGAAAATGGAGAGCAACATGATGGTGATATTTTAATAGGAGCAGATGGAATATGGTCAGAAGTTCGCTCAAAACTCTTTGGGCGGCAAGAAGCAAATTACTCGGGTTTCACATGCTATAGTGGATTAACAAGCTATGTGCCCCCATATATTGATACAATTGGGTATCGGGTGTTCTTGGGCATGAACCAGTACTTTGTTGCTTCAGATGTTGGCCATGGAAAGATGCAATGGTATGCATTCCATGGGGAACCCCCTTCAAATGACCCTTTCCCAGAAGGCAAGAAGAAGAGGCTTTTGGATCTCTTTGGTAATTGGTGCAATGAAGTGGTTGCACTCATATCAGAAACACCAGAGAATATGATTCTGCAGAGGGATATATATGACAGAGACATGATCAACACATGGGGAATTGGGAGAGTGACTTTGTTAGGTGATGCAGCTCATCCAATGCAACCAAATCTTGGTCAAGGGGGTTGTATGGCGATAGAGGATTGTTACCAACTGATACTTGAGCTTGACAAGATTGCTAAACATGACCCTGATGAGTCTGAAGTTAACTCAGCGTTAAGAAGATATGAGAAGAAAAGAATCCCACGAGTAAGGGTGTTACACACAGCTAGCAGGATGGCTTCAAAAATGCTAGTCAACTATAAACCTCATATTGAGTTTAAATTTTGGCCCCTATCAAAGAATGTAACAAATATGCAGATAAAGCACCCTGGAATTCATGTAGCTCAAGCCTTTTTCAAGTTCACTTTTCCACAATTTGTTACATGGATGATTGCAGGACATGGGTATCTTCTTTTACCATTGTTTTCTCTAGAAAATTAG 1449 0.4258 MASVQILCACTSSQVQHQGSIRYRYGQPNERINKRRCSVRVEGGKGMVLPNLEEEKRNLRVLVAGGGIGGLVLALAAKHRGYEVKVFEKDLSSVRGEGKHRGPIQLLSSALAVLEAIDQSVAWQIMEAGCVTGNRTNGLADGLSGEWFSMFDLLTPASKKKLPLTLVICRMSLQDILVNAVGSNILRNKCKVVDFIQEPSQVRVILENGEQHDGDILIGADGIWSEVRSKLFGRQEANYSGFTCYSGLTSYVPPYIDTIGYRVFLGMNQYFVASDVGHGKMQWYAFHGEPPSNDPFPEGKKKRLLDLFGNWCNEVVALISETPENMILQRDIYDRDMINTWGIGRVTLLGDAAHPMQPNLGQGGCMAIEDCYQLILELDKIAKHDPDESEVNSALRRYEKKRIPRVRVLHTASRMASKMLVNYKPHIEFKFWPLSKNVTNMQIKHPGIHVAQAFFKFTFPQFVTWMIAGHGYLLLPLFSLEN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00234 482 SUPERFAMILY FAD/NAD(P)-binding domain 59 427 IPR036188 -
Spst11g00234 482 Gene3D - 60 441 IPR036188 -
Spst11g00234 482 PANTHER - 51 471 - -
Spst11g00234 482 Pfam FAD binding domain 337 407 IPR002938 GO:0071949
Spst11g00234 482 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 60 82 - -
Spst11g00234 482 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 343 358 - -
Spst11g00234 482 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 213 228 - -
Spst11g00234 482 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 358 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00234 Spst-Chr11 7858724 7861867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00234 54 370 Miscellaneous Gene Families AT4G38540 24.927 7.18e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00234 K09838 - gmx:100778602 821.617