Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00233 ATGGTATGCAAAGCCAAAACAAACTCATCTTTTTCCATTAGGGTCCACGTTGAAGCTCACAGACAAATTGTAGTGTATGATCCAAAGGGTCATGACACGTGGCACCGTCCAGAAAACAACACTGTCCCTTTGGTATCATGCGCTTCTATGCTAGACAATGGAAGTTTTGTGCTTGTGGATGAAGGTGGGAAGAAGGTTTGGGAGAGCTTTGAGGAGCCCACAGATACCATTTTGCCTGGTCAGAATTTGGCTAAGCCTAAAAGCTTCAGAGCACGACAATCTGACACGAGTTTTGCTATGATGATGAAAGCTCTCAATCTCCCACACATGAGGCTTACTGGGCCACTGGAACTTTCAAGATCACAGCTCTTCTTCGATGAGTCTGGACGCATGTACATAAAAAATGACACAGGTACAGTAATCAGTGAAATCACATATGGTGGATCAGATGAGTTCTTTTACATGGCTAGAATTGACCCTGATGGGGTTTTCAGACTATATCGGCACCCAAAAGGTGAGCACACAGCTGTTGCTAATAGCTGCAGTTCCAGATGGTGGAGTGTGGAGCAACAGTATCCACAAGATATTTGTCTTTCCTTCACGAGGCAAACTGGCAATGTTATCTGCGGCTTTAACAGCTACTGTGTTACCATCAATGATAGGAGTAGTTGTGAGTGCCCAGATCATTATTCTCCTTTTGAACATGACAATCTCACCGGTTGTAGACCAGATTTTCCACTGCGTAGTTGCAAAAGAGACGGGTGGGAGCAGAATAAGGATCTTGTAGATTTCAAAGAATATAGCAATTTGGACTGGCCTCTCTCTGATTATGACAGGTGGATTGGAACTGCAATGGACAAGGATATGTGTAGACAAAAGTGCCTTGAAGATTGTTTTTGTGCAGTGGCCATATATGGTGAGGGCAAATGTTGGAAGAAGAAGTATCCTTTGAGCAATGGAAGGAAGCACCCTAATGTGACTAGAATTGCTCTTGTCAAGGTGCCTAAAACTGATTTAAATAAAGGGGAAAAGGAACAGACCACACTTGTTCTTGTCATATCAATACTACTTGGAAGCTCAGCGTTCCTAAATGTTCTTCTACTCGTTGCTTTGTTTGCTGTCTTTTTCGTTTTCTACCACAAGAGGCTTTTGAATAGCCCAAACTTGTCACTTGGTACAATAAGCTACTTCACATACAAGGAGCTTGAAGAAGCAACCACAGGGTTCAAACAAATGTTGGGTGCTGGTGCTTTTGGAACTGTGTATAAAGGGGTGTTGACATCAAACACAAGCAGGTATGTTGCTGTGAAGAGGCTTGACAAGGTTGTGCAAGAAGGTGACAAGGAGTTCAAAACAGAAGTGAGTGTGATTGGACAAACCCACAACAGGAACTTGGTCCGTTTACTTGGTTATTGTGATGAAGGGGAGCATCGTCTTTTGGTGTATGAGTACATGAGCAATGGTTCATTGGCTGGGTTTCTGTTTGGGATCTCAAGGCCTCATTGGAACCAAAGAGTGCAAATTGCTTTGGGAATTGCAAGGGGACTCACTTATTTGCACGAAGAGTGCAGCACTCAGATCATTCATTGTGACATAAAGCCTCAGAATATACTCCTAGATGACTTGTTCACACCTAGGATTGCTGATTTTGGGTTGGCAAAGTTGTTGTTGGCTGAGCAAACCAAAGCTGCTAGGACGGGTTTGAGAGGGACAATTGGTTACTTTGCACCTGAATGGTTCAGGAAAGCTTCAATCACAACCAAAGTAGATGTGTACAGCTTTGGAGTGGTGCTGTTAGAGATCATATGTTGCAAGTCAGGTGTTGCCTTTGCGCTGGAAAGTGAAGAAGATGCACTAATAGATTGGGCTTATCGTTGTTATAGCCGAGGAAAGGTGGCTAAATTGGTAGAAAATGATGAGGATGCAAAGAATGATATAAAGTGGGTGGAGAAGCATGTGATGGTTGCAATTTGGTGCACTCAAGAAGATCCTTCACTCAGACCCTCCATGAAGAAGGTTACACAAATGCTCGAGGGTGTTACAACAGTTTCTGTGCGTCCTTGCCCTTCTATTCGGAGTCTGAGTCGACCCGCCGCGATCTCAAACACTCATTCATTTTCTCCGACTCACAAAGCCAACCTTTTTGTTTTTGTTGTGTTCTTCTCTTTGAATCTGAATCAATCCTTCAATCGCTCTACCGGATTGCTTCGATCTGCAAGCTGGCTATGGACTACGAACCCTATGACAGTAGCGGTAATCTCTCTCCCCCCACTCTCTTCCCCTTTTAGGTTTAGGTCGCAACTGAGATACGCTTTTGCTTTATGGTTCTTGCTCGTTCACTCGCTTGACCTAAATTTCGAGGTGAAAAGAGGGTGGGGGGACGACAAGACACTGTCTGTGTACTGCGACTCATTATGCACAGAAGGAATGGTTGCTGTGTCATTTCAGTGGATGGGAACTGATGATGATCTTCCACCAACCCATCAGAATAGAATTTCCAGGGGAGGAGGGGGAGGAGGAGGGGGACGTCTAGCTGGGAATGGAAGATCAGCTGTTGGTTCAATTCCGTACCCTAGGATGTATGGGGAAATTGATATGGAGACCCAAATTCATCAGCTTGAGCAAGAAGCGTACAGTTCAGTTCTAAGAGCCTTTAAAGCTCAAGCCGATGCCATTACTTGGGAGAAAGAAAGTTTGATTACAGAGCTGAGAAAAGAACTGAGATTGTCAAATGAGGAGCACAGAGAACTTCTAGGTCGAGTTAATGCAGATGATGTGATACGGAGGATAAGGGAGTGGAGACAGACAGGTGGCCATCAGCCTGGTGTACTTAGTACTGGTCAAGGTCTTCATGACTCAGTTCCCAGTCCTACGGTCTCTGCTTCTCGCAAAAAGCAGAAGATTACACCATCTGTACCATCACGATCTTTTGGTGGGCCTTCTCCTCCATTTCACCCCCAAACAGTGACTGCACCCCACCAACCATCTTCTTCTGCAGCGAAACGAGGATCTGTTCCTGGATCAAAGGGAAAGAAACACAAACCTGGTCAAATATTACCCGGTGTCTCTTCAATGAAACAGTATCCTTCCTCTGGACCAGCTGGAAGGAATCAAGCACCTAATAGAGCTGTCGCAGGTGAGCATGCGGAGGGAGCATCATTTGACTCTTTGGTTGGTAGGAGAGTGCGGACAAGATGGCCTGACGACAATAACTTTTATGAAGCTGTTATCACGAATTACAATCCAGCTGATGGACGCCATAATCTGGTCTATGACATGGGAAGTGCAAATGAAACATGGGAATGGGTTAATCTTTCAGAGATATCTCCTGAAGATATTCAATGGGTTGGCGAGGATCCTGGAATCAATCATCGTGGGGGTTTCGGGGGCTCTGGTCATGGGGTGAATAGGTCTGTTGGACGAGATGGTGTTCCTGGAGGTGGAAGAGGTAGAGGAGCTACAAAGGGGCAATCCAGAAAAGATTTTTTGTCATCACAGAATGGCATAGGAAAGAAGGCGCCTGATGATATACAAATACTTCACACAGACACACTAATCAAGGAGGTGGAGAGGGTATTCAGTGTAAATCATCCTGATCCCCTTGAAATTGAGAAAGCAAAGAAAGTATTGAAGGATCATGAACAGGCTCTTATTGATGCAATAGCAAGACTTAATGATCTCTCTGATGGTGAAAGTGATGGGGCTGGCCATCATTTCTCACATGCCCAATCAATGGATCGAGAGTGA 3747 0.4478 MVCKAKTNSSFSIRVHVEAHRQIVVYDPKGHDTWHRPENNTVPLVSCASMLDNGSFVLVDEGGKKVWESFEEPTDTILPGQNLAKPKSFRARQSDTSFAMMMKALNLPHMRLTGPLELSRSQLFFDESGRMYIKNDTGTVISEITYGGSDEFFYMARIDPDGVFRLYRHPKGEHTAVANSCSSRWWSVEQQYPQDICLSFTRQTGNVICGFNSYCVTINDRSSCECPDHYSPFEHDNLTGCRPDFPLRSCKRDGWEQNKDLVDFKEYSNLDWPLSDYDRWIGTAMDKDMCRQKCLEDCFCAVAIYGEGKCWKKKYPLSNGRKHPNVTRIALVKVPKTDLNKGEKEQTTLVLVISILLGSSAFLNVLLLVALFAVFFVFYHKRLLNSPNLSLGTISYFTYKELEEATTGFKQMLGAGAFGTVYKGVLTSNTSRYVAVKRLDKVVQEGDKEFKTEVSVIGQTHNRNLVRLLGYCDEGEHRLLVYEYMSNGSLAGFLFGISRPHWNQRVQIALGIARGLTYLHEECSTQIIHCDIKPQNILLDDLFTPRIADFGLAKLLLAEQTKAARTGLRGTIGYFAPEWFRKASITTKVDVYSFGVVLLEIICCKSGVAFALESEEDALIDWAYRCYSRGKVAKLVENDEDAKNDIKWVEKHVMVAIWCTQEDPSLRPSMKKVTQMLEGVTTVSVRPCPSIRSLSRPAAISNTHSFSPTHKANLFVFVVFFSLNLNQSFNRSTGLLRSASWLWTTNPMTVAVISLPPLSSPFRFRSQLRYAFALWFLLVHSLDLNFEVKRGWGDDKTLSVYCDSLCTEGMVAVSFQWMGTDDDLPPTHQNRISRGGGGGGGGRLAGNGRSAVGSIPYPRMYGEIDMETQIHQLEQEAYSSVLRAFKAQADAITWEKESLITELRKELRLSNEEHRELLGRVNADDVIRRIREWRQTGGHQPGVLSTGQGLHDSVPSPTVSASRKKQKITPSVPSRSFGGPSPPFHPQTVTAPHQPSSSAAKRGSVPGSKGKKHKPGQILPGVSSMKQYPSSGPAGRNQAPNRAVAGEHAEGASFDSLVGRRVRTRWPDDNNFYEAVITNYNPADGRHNLVYDMGSANETWEWVNLSEISPEDIQWVGEDPGINHRGGFGGSGHGVNRSVGRDGVPGGGRGRGATKGQSRKDFLSSQNGIGKKAPDDIQILHTDTLIKEVERVFSVNHPDPLEIEKAKKVLKDHEQALIDAIARLNDLSDGESDGAGHHFSHAQSMDRE 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00233 1248 SUPERFAMILY Tudor/PWWP/MBT 1056 1096 - -
Spst11g00233 1248 ProSiteProfiles Protein kinase domain profile. 407 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00233 1248 Coils Coil 900 920 - -
Spst11g00233 1248 CDD PAN_AP_plant 245 335 - -
Spst11g00233 1248 Gene3D - 1051 1102 - -
Spst11g00233 1248 SUPERFAMILY alpha-D-mannose-specific plant lectins 22 85 IPR036426 -
Spst11g00233 1248 Coils Coil 1203 1223 - -
Spst11g00233 1248 ProSitePatterns Protein kinases ATP-binding region signature. 413 437 IPR017441 GO:0005524
Spst11g00233 1248 FunFam S-receptor-like serine/threonine-protein kinase 381 484 - -
Spst11g00233 1248 FunFam Protein EMSY-LIKE 3 1056 1108 - -
Spst11g00233 1248 Pfam Protein tyrosine and serine/threonine kinase 409 677 IPR001245 GO:0004672|GO:0006468
Spst11g00233 1248 MobiDBLite consensus disorder prediction 1127 1175 - -
Spst11g00233 1248 Gene3D Transferase(Phosphotransferase) domain 1 485 686 - -
Spst11g00233 1248 CDD Tudor_Agenet_AtEML-like 1058 1108 - -
Spst11g00233 1248 SUPERFAMILY Protein kinase-like (PK-like) 389 678 IPR011009 -
Spst11g00233 1248 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 13 689 - -
Spst11g00233 1248 MobiDBLite consensus disorder prediction 1023 1037 - -
Spst11g00233 1248 FunFam Protein EMSY-LIKE 3 isoform A 861 991 - -
Spst11g00233 1248 Pfam D-mannose binding lectin 13 91 IPR001480 -
Spst11g00233 1248 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Spst11g00233 1248 MobiDBLite consensus disorder prediction 937 1048 - -
Spst11g00233 1248 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 866 953 IPR005491 -
Spst11g00233 1248 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 485 685 - -
Spst11g00233 1248 Gene3D Phosphorylase Kinase; domain 1 379 484 - -
Spst11g00233 1248 Gene3D ENT domain 861 970 IPR036142 -
Spst11g00233 1248 Gene3D - 5 114 - -
Spst11g00233 1248 CDD STKc_IRAK 413 679 - -
Spst11g00233 1248 MobiDBLite consensus disorder prediction 1229 1248 - -
Spst11g00233 1248 SMART ENT_2 866 939 IPR005491 -
Spst11g00233 1248 MobiDBLite consensus disorder prediction 939 975 - -
Spst11g00233 1248 Pfam ENT domain 868 935 IPR005491 -
Spst11g00233 1248 SUPERFAMILY ENT-like 861 977 IPR036142 -
Spst11g00233 1248 MobiDBLite consensus disorder prediction 1230 1248 - -
Spst11g00233 1248 SMART serkin_6 407 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00233 Spst-Chr11 7847713 7856711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00233 377 679 Receptor kinase-like Gene Family AT1G60800 42.122 9.60e-68 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst11g00233 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00233 - - gmx:100796323 1152.89