Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00225 ATGGCAAAGTCCAAGAACAATGCCAAGAAGTTGTCCTACATTTCGGTTCCTTCTCAGATCATCAACTCCATATCATCATCTTCTCTTCAATCCTTGCTAGAATCCCCCAAGAAATGTGCAAGACAGTCCAGATTTTTCACCTTTGTCAAGTGGGGTAGGCTAAGATTGTTTCTTTTCACTCTCTCTCTCCTTGCTTTCTTTGCCATACTCAAGTTGGGGCTCAATCTGGACACCCCATTTCCGCCCTTCCCTTGCGGAACCTCGGCAGGCCTCTCAAAATCCGAGTTTGGAGTTCCAGTACAGGAAGGTGGTGTTTTGGATGGTGTTGATGACACCGTTTCAGAGCCTCTGGTTGCCAGTGTGCAGTTACATGCACAGGTTCCAAGTGGGGTGGAAAGGGGTGAGGAGGTTGAAAAGAGTGAGTTTTGGGAGCAGCCAGATGGGTTGGGGTATAAGCCTTGCTTGGGTTTCAGCAGAGAGTATAGGAGTGAGAGTGAGAGGGTGGTGAATAACAGGAGGAGGTACCTCATGGTGGTGGTTTCTGGAGGGATGAATCAGCAGAGAAATCAGATTGTTGATGCTGTTGTCATTGCTAGGATTCTTGGAGCTGCTTTGGTTGTTCCTATACTGCAAGTCAATGTCATTTGGGGAGATGAAAGTGAATTTGCTGATATATTTGATTTGGATCACTTCAAGAGTGATCTTGCCAATGATGTGAGGGTGGTTTCAGCTTTGCCATCAACACATCTAATGACAAGGCCAGTGGAGGGGAGCCCTCTCCCTCATGCCACTCCAAATTGGATTCGGTCACACTATCTCAGAAGATTCAACAGAGAAGGTGTCTTGCTTTTGCGTGGACTGGATTCGAAACTGACAAAGGATCTCTCTCCTGATCTTCAGAAGCTCCGATGCAAGGTTGCTTTTCATGCATTAAGGTTTGCAAAGCCTGTTCAGGAACTTGGTGACAACATTGCAGAGAGAATGAAAAGCAAGGGACCTTACCTTGCTCTTCATCTACGGATGGAAAAGGATGTGTGGGTGAGAACTGGTTGTCTACCTGGTTTGAGTCCTGAGTATGATGAGATGATAAACAAAGAGAGGCTAAATCGACCCGAGCTCCTAACGGCGAAATCAAACATGACATACCATGAAAGGAGGCTGGCTGGCCTCTGCCCCTTGAATGCTGTGGAGGTTACCAGGCTGCTTAAAGCTCTGGGAGCTCCAAAAAATGCAAGAATTTATTGGGCTGGAGGACAACCACTAGGTGGAAAAGAGGCCTTGCAACCATTAATCAACGAGTTTCCATATCTTTACAGTAAGGAAGATATTGCCTTACCTGGAGAACTAGAACCATTTGCAAATAAAGCTTCCCTAATGGCTGCCATAGATTACATAGTCTCCGAGAAGAGTGATGTTTTCATGCCATCTCATGGAGGAAATATGGGCCATGCAATTCAGGGTCACCGGGCCTATGCAGGACACAAGAAATATATAACACCAAACAAAAGACAGATGCTACCCTATTTTCTGAACTCTTCCCTCCCTGAAGAAGAGTTCAACAGCATTGTCAAGGAATTGCATCAGGAGTCATTAGGTCAGCCAGAACTGAGGACTAGCAAGGCTAGAAGAGATGTCACCAAGTATCCTGTTCCTGAGTGCATGTGCAATGACAAATAA 1677 0.4592 MAKSKNNAKKLSYISVPSQIINSISSSSLQSLLESPKKCARQSRFFTFVKWGRLRLFLFTLSLLAFFAILKLGLNLDTPFPPFPCGTSAGLSKSEFGVPVQEGGVLDGVDDTVSEPLVASVQLHAQVPSGVERGEEVEKSEFWEQPDGLGYKPCLGFSREYRSESERVVNNRRRYLMVVVSGGMNQQRNQIVDAVVIARILGAALVVPILQVNVIWGDESEFADIFDLDHFKSDLANDVRVVSALPSTHLMTRPVEGSPLPHATPNWIRSHYLRRFNREGVLLLRGLDSKLTKDLSPDLQKLRCKVAFHALRFAKPVQELGDNIAERMKSKGPYLALHLRMEKDVWVRTGCLPGLSPEYDEMINKERLNRPELLTAKSNMTYHERRLAGLCPLNAVEVTRLLKALGAPKNARIYWAGGQPLGGKEALQPLINEFPYLYSKEDIALPGELEPFANKASLMAAIDYIVSEKSDVFMPSHGGNMGHAIQGHRAYAGHKKYITPNKRQMLPYFLNSSLPEEEFNSIVKELHQESLGQPELRTSKARRDVTKYPVPECMCNDK 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00225 558 CDD O-FucT_plant 175 496 IPR024709 -
Spst11g00225 558 Pfam GDP-fucose protein O-fucosyltransferase 175 491 IPR019378 -
Spst11g00225 558 PANTHER OS02G0726500 PROTEIN-RELATED 61 556 - -
Spst11g00225 558 PIRSF UCP009360 15 558 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00225 Spst-Chr11 7706411 7709861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00225 10 556 Miscellaneous Gene Families AT3G07900 63.121 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00225 - - vun:114169624 958.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00225 11 7706411 7709861 Spst11g00225 11 7706411 7709861 ECH