Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00204 ATGGCTGATCGGGTTCAGCACCCTAGAGTCGTTGAGAAGGTTGCAGGCCAGCTACATCTTCGTACTGGCCTTCCATTGTACCACCAGAGGCAATCTTTCTCGAATTACTCGAATGCTGCAATGCAGTATTATGGGATGCCAACATCCAGAGGTGCAATATATGTCCCTGCTGTAGCAGCAACATCCTCACCTGTGTTTGTTGCAGCTCCTGCTGAGAAGGGAAACTTCCTTATTGACTTTCTCATGGGTGGAGTTTCTGCTGCTGTATCCAAAACTGCTGCTGCCCCCATTGAACGCGTCAAACTCTTGATCCAAAACCAGGATGAGATGATCAAAGCCGGTAGACTCTCTGAGCCCTATAAAGGTATTGGTGACTGTTTTAAGAGAACAATGCAGGAAGAGGGTGCTGTCTCCCTGTGGAGAGGTAATACTGCAAATGTCATCCGTTATTTCCCTACTCAGGCCCTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGAAAGGGATGGTTACTGGAAATGGTTTGCTGGTAACTTGGGCTCAGGAGGTGCTGCTGGTGCCTCATCCCTCCTATTTGTCTACTCCCTTGACTATGCTCGTACCCGTTTGGCTAATGATGCCAAGGCTGCCAAGAAGGGTGGAGAAAGGCAATTCAATGGCCTTGTTGATGTCTACAAAAAGACATTAGCTTCTGATGGTGTTCCTGGTCTTTACCGCGGCTTCAACATTTCCTGTGTTGGAATCATTGTGTATCGTGGTCTCTACTTTGGAATGTATGATTCCCTCAAGCCAGTTCTCTTAACCGGCTCTTTACAGGATAGCTTTTTTGCTAGCTTTGCTCTTGGATGGTTGATCACGAATGGTGCAGGTTTAGCCTCATACCCAATTGACACTGTGAGAAGAAGAATGATGATGACATCCGGTGAAGCTGTGAAGTACAAGAGCTCCATGGATGCATTTAGACAAATCCTTAAAAATGAGGGTGCCAAGTCCTTGTTTAAGGGAGCTGGTGCCAACATTCTTCGTGCTGTTGCTGGTGCTGGTGTGCTTGCTGGTTATGACAAATTGCAGGTCATAGTCTTTGGGAAGAAGTATGGCTCTGGTGGAGCTTAA 1131 0.466 MADRVQHPRVVEKVAGQLHLRTGLPLYHQRQSFSNYSNAAMQYYGMPTSRGAIYVPAVAATSSPVFVAAPAEKGNFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTMQEEGAVSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKERDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLASDGVPGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFRQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00204 376 PRINTS Mitochondrial carrier protein signature 79 92 IPR002067 GO:0055085
Spst11g00204 376 PRINTS Mitochondrial carrier protein signature 142 162 IPR002067 GO:0055085
Spst11g00204 376 PRINTS Mitochondrial carrier protein signature 288 310 IPR002067 GO:0055085
Spst11g00204 376 PRINTS Mitochondrial carrier protein signature 244 262 IPR002067 GO:0055085
Spst11g00204 376 PRINTS Mitochondrial carrier protein signature 92 106 IPR002067 GO:0055085
Spst11g00204 376 PRINTS Mitochondrial carrier protein signature 194 212 IPR002067 GO:0055085
Spst11g00204 376 FunFam ADP,ATP carrier protein, mitochondrial 77 372 - -
Spst11g00204 376 Gene3D Mitochondrial carrier domain 77 372 IPR023395 -
Spst11g00204 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 279 365 IPR018108 -
Spst11g00204 376 Pfam Mitochondrial carrier protein 280 365 IPR018108 -
Spst11g00204 376 Pfam Mitochondrial carrier protein 178 274 IPR018108 -
Spst11g00204 376 Pfam Mitochondrial carrier protein 75 171 IPR018108 -
Spst11g00204 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 167 IPR018108 -
Spst11g00204 376 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 65 375 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Spst11g00204 376 SUPERFAMILY Mitochondrial carrier 74 361 IPR023395 -
Spst11g00204 376 PRINTS Adenine nucleotide translocator signature 284 300 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Spst11g00204 376 PRINTS Adenine nucleotide translocator signature 120 141 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Spst11g00204 376 PRINTS Adenine nucleotide translocator signature 153 165 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Spst11g00204 376 PRINTS Adenine nucleotide translocator signature 76 88 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Spst11g00204 376 PRINTS Adenine nucleotide translocator signature 179 192 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Spst11g00204 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 179 271 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00204 Spst-Chr11 7500045 7501538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00204 1 376 Antiporters AT5G13490 78.316 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00204 K05863 - gmx:100793257 657.521