Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00194 ATGAGATTTAACATGAAAACTGGCGAAGCTTCTCAGAAGAAACTATCAGCATCTACTGTAGATTTTCCTAGAGTGAATGAAAGCTACACTGGCAGAAAGCAGCGATACGTGTATGGAACCACATTAGACAGCATTGCAAAAGTTACTGGTATTATTAAATTTGATTTGCACGCCGAACCAGATCATGGGAAAACAAAACTCGAAATTGGAGGAAATGTTCAGGGTCTCTATGAATTGGGACCAGGGAAGTTTGGCTCAGAAGCTGTTTATATCCCGCGTGTCCCTGGCACCGAGTCTGAAGAAGATGATGGATACTTGATTTTATTTGTACACGATGAAAACGCCGGAAAATCATTTGTGCATGTGATTGATGCAAAAACAATGTCAGCAGATCCTGTTGCAGTGGTGGAATTGCCCAACAGAGTTCCATATGGTTTTCATGCCTTCTTTGTGACAGAGGAACAATTGCAAGAACAGGCAAAACTGTGA 489 0.4151 MRFNMKTGEASQKKLSASTVDFPRVNESYTGRKQRYVYGTTLDSIAKVTGIIKFDLHAEPDHGKTKLEIGGNVQGLYELGPGKFGSEAVYIPRVPGTESEEDDGYLILFVHDENAGKSFVHVIDAKTMSADPVAVVELPNRVPYGFHAFFVTEEQLQEQAKL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00194 162 Pfam Retinal pigment epithelial membrane protein 1 151 IPR004294 GO:0016702
Spst11g00194 162 PANTHER BETA-CAROTENE DIOXYGENASE 1 153 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00194 Spst-Chr11 7317829 7318981 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00194 K00465 - gmx:100789210 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00194 11 7317829 7318981 Spst11g00194 11 7317829 7318981 ECH