Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00168 ATGTCACCCTCTTCTTCTCTCATTTTCTTTTTACTGTATCTTTGCAACCTTTCTTTCTTAGACGCTCTCGATGGTGGATTCAGTGTGGAGATCATCCACCGTGATTCACCAAAATCACCGTTCTATCGCTCCACAGAAACTCACTTCCAAAGGGTTTCCAATTCTCTGCGTCGTTCAATCAATCGTGTCAATCATTTCAACGAATCCTTTGTGTCTCCAAACACACCAAAGGCCATTGTATTCTCAGATTTTGGTGAATACGTGATGAGGTATGCAGTTGGAACCCCACCAGTGAAGGTCTTTGGAATTATTGATACGGCTAGTGACATTATTTGGATGCAATGCAAACCATGCAAAAAATGTTACAGGCAAGCCACTCCTTTCTTTGATTCTAGAAAATCTGTAACATACAAAACCATCCCTTGCAATTCTAAGACATGTGATTCGGTGCTAGGTACCGCTTGCACCTCTCAGTTTACAAAACACTGTACATATAATATTTACTACGGGGATGGGACATACTCACATGGAGATCTTAGTGAAGAGACTCTCACTTTAGCCTCCACCAATGGTTTTCCTGTCAAACTTCCTGGAACTACAATAGGATGTGGTCGTTACAATGGTATGGTCTTTAAAGGGGCAAATTCTGGCATAGTTGGCCTAGCACGTGGACCTGTGTCCCTTGTAACTCAACTGGGTCCTTCAGTAGGTTGGAAGTTTTCTTATTGTTTGGTCCAAGCAATTTCAAAATCCAATTCAACTAGCAAACTCAATTTTGGAGATGCTGCTATGGTTTATGGGCCTGGAACTGTCTCAACACCATTATTCTCACACAATAAACAACTATTTTACTACCTAACGTTAGAAGGATTAAGTGTTGGAAGCAATAGAATAGAGTTTGGAAGCTCTTTACTTACATCTGGTGGAGGTGGAAATATCATAATTGACTCAGGTACTACACTCACTTTTTTACCAGAAGATGTTTACTCAAGGTTGGAATTAGCAGTGGCACAGGACGTTAAATTGAAGCGTACTAAGGATCCAAATCAAGTGTTGGGGCTTTGCTACGAAGGTACATTAGATAAACTAGATTTACCAGTGATCACAGCACATTTTAGTGGGGCAAATGTTCTTTTATATGCTATTAACACCTTTGTTGAAGTGGCTGATGGGGTTGTATGCTTGGCTTTCCAGCCAAGTCAAAACAATGGTGCCATCTTTGGGAATTTGGCTCAGCAAAACCTTTTAATTGGCTATGACCTCCAAAAAAATACAGTGTCCTTTAAGCACACAGATTGCTCTAAGATGTGA 1311 0.4058 MSPSSSLIFFLLYLCNLSFLDALDGGFSVEIIHRDSPKSPFYRSTETHFQRVSNSLRRSINRVNHFNESFVSPNTPKAIVFSDFGEYVMRYAVGTPPVKVFGIIDTASDIIWMQCKPCKKCYRQATPFFDSRKSVTYKTIPCNSKTCDSVLGTACTSQFTKHCTYNIYYGDGTYSHGDLSEETLTLASTNGFPVKLPGTTIGCGRYNGMVFKGANSGIVGLARGPVSLVTQLGPSVGWKFSYCLVQAISKSNSTSKLNFGDAAMVYGPGTVSTPLFSHNKQLFYYLTLEGLSVGSNRIEFGSSLLTSGGGGNIIIDSGTTLTFLPEDVYSRLELAVAQDVKLKRTKDPNQVLGLCYEGTLDKLDLPVITAHFSGANVLLYAINTFVEVADGVVCLAFQPSQNNGAIFGNLAQQNLLIGYDLQKNTVSFKHTDCSKM 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00168 436 FunFam Probable aspartic protease At2g35615 67 260 - -
Spst11g00168 436 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 313 324 IPR001969 GO:0004190|GO:0006508
Spst11g00168 436 Gene3D Acid Proteases 66 259 IPR021109 -
Spst11g00168 436 SUPERFAMILY Acid proteases 84 434 IPR021109 -
Spst11g00168 436 Pfam Xylanase inhibitor C-terminal 284 429 IPR032799 -
Spst11g00168 436 FunFam Aspartic proteinase CDR1 262 436 - -
Spst11g00168 436 PANTHER OS07G0603500 PROTEIN-RELATED 29 434 - -
Spst11g00168 436 CDD pepsin_A_like_plant 86 433 IPR034161 -
Spst11g00168 436 ProSiteProfiles Peptidase family A1 domain profile. 87 429 IPR033121 -
Spst11g00168 436 Gene3D Acid Proteases 260 436 IPR021109 -
Spst11g00168 436 Pfam Xylanase inhibitor N-terminal 87 261 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00168 Spst-Chr11 7023187 7024497 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00168 74 436 Miscellaneous Gene Families AT1G44130 26.396 7.03e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00168 - - gmx:100790610 576.63