Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00164 AATGGACAATTATCTAGAGCAGTTGGTGCTGTAGCGAAACTAATTGCAAAAGAGGGGAAATTGGCCACATTAAAATTACCTTCTGGGGAGGTTCGTTCGATATCCAAAGACTACTCGGCAACAGTCAGACAAGTGGGAAATGTTGGGGTAAACAAAAAAAACTTAGGTAGAGCTGGATCTAAATGTTGGCTAGGTAAGTGTCCTATAGTAAGAGGAGTAGTTATGAACCCTGTATACCATCTGCATGGGGGTGGTGAAGGGAGGACCCCAATTGGTAGAAAAAACTCACAACTCCTTGGGGTTTTCCTACACTTGGAAGAA 321 0.4299 NGQLSRAVGAVAKLIAKEGKLATLKLPSGEVRSISKDYSATVRQVGNVGVNKKNLGRAGSKCWLGKCPIVRGVVMNPVYHLHGGGEGRTPIGRKNSQLLGVFLHLEE 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00164 107 Gene3D Ribosomal protein L2, domain 3 47 105 IPR014726 -
Spst11g00164 107 SUPERFAMILY Translation proteins SH3-like domain 2 102 IPR008991 -
Spst11g00164 107 SMART Ribosomal_L2_C_2 2 103 IPR022669 GO:0003735|GO:0005840|GO:0006412
Spst11g00164 107 Pfam Ribosomal Proteins L2, C-terminal domain 2 95 IPR022669 GO:0003735|GO:0005840|GO:0006412
Spst11g00164 107 Gene3D - 1 46 IPR014722 -
Spst11g00164 107 PANTHER RIBOSOMAL PROTEIN L2 2 97 IPR002171 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00164 Spst-Chr11 6645346 6645666 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00164 2 85 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 40.000 3.29e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00164 K02886 - csin:14412467 172.555