Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00154 ATGCCGTTCGGGCAAGGTGACGACGCCAATGCTGGAAGAGAATGCAAGGATGGCCTCCTCTGGTTCTGCGACATCGGAAGGTTTGCCGCCGGCGATTTCTCCATGGCCGTCGTTCAGGCTAATCAGGTACTCGAGGACCAGAGCCAGATCGAGTCCGGACCCTTCGGCACCTTCGTCGGCGTCTACGACGGCCACGACGGTCCTGATTGCTCGCGATACGTTTGCGATAACTTGTTCTGTAATCTCCAAGCGATATTGGCCGAGTCACAGAGTGTTGTGACATCTGAGGCCATTCAACAAGCGTTTCGGCGGATTGAGGAGGGGTTCACGGCGCTTGTTTCAAAGTTGTGA 351 0.5584 MPFGQGDDANAGRECKDGLLWFCDIGRFAAGDFSMAVVQANQVLEDQSQIESGPFGTFVGVYDGHDGPDCSRYVCDNLFCNLQAILAESQSVVTSEAIQQAFRRIEEGFTALVSKL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00154 116 PANTHER PROTEIN PHOSPHATASE 30 113 IPR015655 GO:0004722|GO:0006470
Spst11g00154 116 Gene3D - 26 115 IPR036457 -
Spst11g00154 116 SUPERFAMILY PP2C-like 41 111 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00154 Spst-Chr11 6137442 6137792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00154 19 116 PP2C-type Phosphatase Gene Family AT3G17090 66.327 4.09e-43 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00154 K01102 - gmx:100813333 206.838