Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00093 ATGTACATATCTTTGTCCTCCTCATCTGAGACTAGTCCAAGCAGCTCAAAAGGCACTGGCTCAGGCACAAGAACAAAAAGTTCTACCAATCTTACTAGTTTCAATTCCAAATATGTCACAGCCGCAGGAGATACTATATATGTAACTGCTGAAGCGGCACACAGAGACAGTGGAACTAACTCTTCAAAGAATAGGAAAAAAAGGATGCATCAGCAGCCATCATTTTCATTGGTTGAAACACCTAGGGAGATACCATTCAAGGAGATAGTTTTGGCCACAGATAACTTCTCAGAGTCCAGAAGGGTGGCTGAGTTAGACTTTGGAACTGCTTACCATGATATCCTAGATGGCCACTACCATGTCATGGTGAAACGCCTTGGCTTGAAGACATGCCCAACATTGCAGCAAAGATTTTCCAATGAGCTAAGAAACCTGGCAAAACTGCGGCACAAGAATTTGGTGCAGCTTAGAGGGTGGTGCATTGAGCAAGGAGAGATGCTTGTGGTGTATGATTACTCGGCTAAAAGATTTCTCAGTCACCGACTTCACCATCATAACAATAGTACTAAAAATGTTCATTCTGTGCTCAAATGGCATCATAGGTATAGCATAGCGAAATCACTTGCGTCTGCACTTCTCTATCTGCACGACGAATGGGATGAACAAGTCATTCACAGGAACATAACCTCTTCAGCAGTGACTCTTGAACCTGACATGAGCCCAAGGCTAGGTAGTTTTGCTCTGGCCGAGTTTCTGTCAAGGAATGAGCATGGCTATCATGTGATCTAA 789 0.436 MYISLSSSSETSPSSSKGTGSGTRTKSSTNLTSFNSKYVTAAGDTIYVTAEAAHRDSGTNSSKNRKKRMHQQPSFSLVETPREIPFKEIVLATDNFSESRRVAELDFGTAYHDILDGHYHVMVKRLGLKTCPTLQQRFSNELRNLAKLRHKNLVQLRGWCIEQGEMLVVYDYSAKRFLSHRLHHHNNSTKNVHSVLKWHHRYSIAKSLASALLYLHDEWDEQVIHRNITSSAVTLEPDMSPRLGSFALAEFLSRNEHGYHVI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00093 262 SUPERFAMILY Protein kinase-like (PK-like) 73 257 IPR011009 -
Spst11g00093 262 ProSiteProfiles Protein kinase domain profile. 96 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00093 262 Gene3D Phosphorylase Kinase; domain 1 55 172 - -
Spst11g00093 262 Gene3D Transferase(Phosphotransferase) domain 1 176 261 - -
Spst11g00093 262 PANTHER - 33 255 - -
Spst11g00093 262 MobiDBLite consensus disorder prediction 53 77 - -
Spst11g00093 262 Pfam Protein tyrosine and serine/threonine kinase 108 255 IPR001245 GO:0004672|GO:0006468
Spst11g00093 262 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00093 Spst-Chr11 1900888 1901676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00093 66 257 Receptor kinase-like Gene Family AT5G01560 35.897 4.16e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst11g00093 PK_Tyr_Ser-Thr 1.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00093 - - gmx:100781955 417.542