Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00092 ATGGGCAGGTTGAGTGAGACTACAAGGATTGGTGGCACAATTGGGTACTTGCCCCCTGAGAGCTTCCAGAGAAGGAGCATTGCTACCTCAAAATATGATGTTTTCAGCTTTGGAATAGTTGTGTTGGAGGTTGTGGCTGGCAGGAGGGCCATTGATCTCACATACCCTGATGAGAAAATCATCTTGCTTGATTGGGTCAGAAGGCTTAGTGATGAAGCTAGGCTTGTTGATGCTAGGGACACAAGGCTGATAGACGGTTCCTATAAGGTTTTTGACATGGAGCAATTGATTCACATAAGCCTCTTGTGCACACGCCATGACCCTCAATTGAGGCCAAGCATGAAATGA 348 0.4655 MGRLSETTRIGGTIGYLPPESFQRRSIATSKYDVFSFGIVVLEVVAGRRAIDLTYPDEKIILLDWVRRLSDEARLVDARDTRLIDGSYKVFDMEQLIHISLLCTRHDPQLRPSMK 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00092 115 Gene3D Transferase(Phosphotransferase) domain 1 2 115 - -
Spst11g00092 115 Pfam Protein tyrosine and serine/threonine kinase 13 57 IPR001245 GO:0004672|GO:0006468
Spst11g00092 115 SUPERFAMILY Protein kinase-like (PK-like) 6 115 IPR011009 -
Spst11g00092 115 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00092 115 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 7 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00092 Spst-Chr11 1899172 1900821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00092 2 115 Receptor kinase-like Gene Family AT1G15530 43.860 2.50e-23 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst11g00092 PK_Tyr_Ser-Thr 2.7e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00092 - - gmx:100781955 202.601