Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00077 ATGGCTGCTTCAGTTACAGGGATCGCGACCACGAACACGGGCGCGGGTGTGGAGTGGCATGTGCGTCCTCCAAACCCTAAGAACCCAATCGTCTTCTTCGATGTCACCATCGGCAACATTCCCGCTGGTCGAATCAAGATGGAACTCTTCGCCGATATTGCTCCCAAAATCGCCGAGAATTTCAGGCAGTTCTGCACTGGGGAGTACAGGTTGTTGTCTTGTGACCCAAAGGTCATGGCTGAAGTGATCCCAATTCTATCCCCAAACGCTGGAATGCCATCCCATTTCTTAGAACCTGTGGAATTGTCAGATCCTGCTGTTTCTTACCATATTCACCAAATGTATAGGTACTCCATCTCCTTGCTGCAACTGAAATCTGCAATTACTTCTGCCTCCTTGCACCTAAAAGCAGGACTACCAGTTGGTTACAAGGGTTGTCAATTTCATAGAGTGATTAAGGATTTTATGATTCAGGCTGGTGATTTTGTAAAGTTCATATTGTGGAATGTCATGAACCAACTCCTCCCATATTTCAGAAGTGCTTCCGATCTCATTGTGGGTGATGGTAGTGGATGTGTTTCAATCTATGGGCTTAAGTTTGATGATGAAAACTTTACTGCCAAACACACTGGCCCTGGCCTTCTGTCGATGGCAAATAGTGGACCAAATACCAATGGTTGTCAGTTTTTTATAACATGCGCAAAATGTGACTGGCTTGACAACAAGCATGTCGTTTTTGGGAGAGTGCTTGGAGATGGCCTTTTGGTTGTGAGGAAGATCGAGAACGTGGCAACCGGACCCAATAACCGACCAAAATTAGCTTGTGTCATTGTAGGATGTGGTGAAATAATGAAAAAGAACATTGGTGTACATAGTAATCCTCCAACTGGGGTGGTGTACATGCATACGCATAAAGCCCAAATTCAAAAGTGGAGCGCGTGCCCGTCACGTGTGTCTCACACGCTCTTTCTTCCATTTCTCTCGTCCCAATACACCAGTTGTACTCTAGGGAAGAATAGAAGCAAGAAGACACGAAAGCGAGCGAGCGAGTTGTGA 1056 0.4593 MAASVTGIATTNTGAGVEWHVRPPNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKIAENFRQFCTGEYRLLSCDPKVMAEVIPILSPNAGMPSHFLEPVELSDPAVSYHIHQMYRYSISLLQLKSAITSASLHLKAGLPVGYKGCQFHRVIKDFMIQAGDFVKFILWNVMNQLLPYFRSASDLIVGDGSGCVSIYGLKFDDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIVGCGEIMKKNIGVHSNPPTGVVYMHTHKAQIQKWSACPSRVSHTLFLPFLSSQYTSCTLGKNRSKKTRKRASEL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00077 351 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 33 281 IPR002130 GO:0000413|GO:0003755
Spst11g00077 351 SUPERFAMILY Cyclophilin-like 21 282 IPR029000 -
Spst11g00077 351 Gene3D - 18 290 IPR029000 -
Spst11g00077 351 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 32 282 IPR002130 GO:0000413|GO:0003755
Spst11g00077 351 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 31 283 - -
Spst11g00077 351 CDD cyclophilin_ABH_like 29 281 - -
Spst11g00077 351 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 143 160 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00077 Spst-Chr11 1356250 1362156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00077 143 271 U-box Gene Family AT5G67530 40.769 1.20e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00077 K09567 - qsa:O6P43_029718 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00077 11 1356250 1362156 Spst11g00077 11 1356250 1362156 ECH