Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00063 ATGGCAGCAACATTGGTTGGTGGTTCTCTTCTTTCTGCTTTCCTTCAGGTTGCATTTGACAGGCTGGCTTCCCCTCAAGTTCTGGACTTCTTTCGTGCAAGAAAACTTGATCAGAAGCTGCTGAGAAAGTTGAAGTGGAAGCTGCGGTCCATTGATGCTTTGGCTGATGATGCAGATCTACAACAGTTCAAAAATCAACGTGTTAAAGCATGGCTTGCTGATGTCAAAGATGCCCTGTTTGAAGCTGAAGATCTCTTGGATGAAATATATGAATTTTCCATACACGAAGTGGAAGCTGAATCTCAAAGAACTGATAACAAGGTGTGGAATTTGAATTTCCCTATATCTTCTGTCAGTTTCTTTAAAAATGAAAGTGAAATTGAAACAAGGATGTCACAAGTCCTTGATGACTTAGATGAACTTGCAAACGAAGGCAGTCGTCTAGGTTTGAAAGAGGCTAGTGGTGTTCGGGTTGGGATTGGGGTTGGTTCAGGATCCGATAGTAAAGTGTCACAAAAATCCTCATCAACATCTTTGTTGAGTGAGAGTGATGACATTTATGGCAGAGATGATGACAAAGATATTATCTTTAACTGGCTCACACCTGACACTGACTATGGTGACAAGTTATTAATACTTTCTATTGTGGGCATGGGCGGTTTGGGTAAAACCACGCTTGCCCAACATGTCTACCATGAGCCGAGGTTAGAAGGTAGATTTGATATCAAAGCCTGGGTCTGTGTTTTGGATGATTTTGATGTTTTCAAGGTAACGAGAACAATTCTTGAGGCGATAACTAAATCAACTGATGATAGTAGAAACCTGGAAATGGTTCAGGGAAGATTAAAAGAAATAATGACAGGTAAGAGATTTTTTCTTGTTTTGGATGACGTTTGGAACGAAAGCCTATCTAAATGGGAGCAAGTGCAGAAAGCTCTTGATTCTGGGGCTCATGGAAGTAGGATTCTTGTCACCACTCGCAGTAAGAAAGTTGCTCTTTCCATGCGCTCAGAAGAGCACCACCTGAAGGAATTACAAGAAGACTATTGCTGGCAGTTGTTTGCAAAACATGCATTTCAAAATGATACTCGTCAACCAAATACAGACTGCAAGGAGATTGGTATGAAGATAATTGAAAGATGTAAAGGACTTCCTCTAGCCTTGAAAACAATGGGAAGTCTGCTACACAATAAATCATCTGTTTCAGAATGGAAAAATGTATTGAAAAGCGAAGTATGGGAATTGGAGGATAGTGATGTGATCCCTGCTTTAGCACTGAGTTATGACCATCTTCCTTCCCATCTCAAGAGATGCTTTGCTTATTGTGCATTATTCCCTAAAGGTTATGAGTTTGACAGAGAGTGCTTAATTCAATTGTGGATGGCTGAAAATTTTCTTCAATGTCATCAACATACCAAGAGTCTAGAAGAAATTGGTGAACAATACTTCAATGATCTATTATCGAGGTCCTCCTTTCAACAATCAAACAGATATAAAACATGTTTTCTCATGCATGACCTTTTAAATGATTTGGCAAAATACGTTTGTGAGGACATCTGTTTCAGGTTGGGAGTTGATAAAGCAAAAGGTATTCCCAAAACAACCCGTCATTTTACATTTGCAACCAATCATGTGGAATATTTTGATGGGTTCGGAAGTATACATGATGTTGAAAGGTTACACACATTTATGCCAACAGATTGGAGTTGGCATTGCAAGATGTCGATAGATGACTTACTGTGCAAGTTTAAGTTTTTACGTGTCTTATCTTTCTCCAACTGTTCTAACCTTACAAAGGTGCCTGACTCACTAGTCAATCTTAAACATCTCCGTTCATTAGACCTCTCCAATACCCACATAGAAAAACTACCCGAGTCCACATGTTCACTCTACAACTTGCAAATACTGAAGCTGAACAATTGTCCACTAATCAAGGAGCTTCCCTCAAATTTACATGAACTCACCAATTTGCGTCGCCTTGAATTTATAGATACTGAACTGACAAAGATGCCAGAACATTTGGGAAAACTGAAGAATCTTCAAGTACTGATGAGTTCGTTTGATGTTGGAAAAAATAGGGAATTCAGCATTCAACAGCTAGGACAGCTAGATCATCATGGAAGGCTATCGATTGGGGAGCTACAGAACATTGAGAACCCCTCGGATGCACTAGCAGTGGATTTGAAAAATAAAAGTCACCTTGCGGGGCTAAAGTTAAAATGGAATAGGGACCAGGACCCTGATGATTCATTAAAAGAAAGGGATGTAAATGTCATTGAGAATCTACAACCTTCCAAGAACTTGGAGAAGTTGTCAATCAGCCACTATGATGGTACAAAATTTCCAACTTGGCTTGGAGATCATTCATTATTGAATGTGGTGTCATTAAGCTTGTTCCAATGTAAATACTGCCAATGTTTGCCCTCCCTTGGACATTTGCCATTTCTCAAGGACCTCACAATTTCAGGGGTTGACGGGGTAAAGGCTATTCATGCTGACTTTTACGGGAGTAACTCTTGTTCATTCACATCCTTGGAGACACTGATGTTCTCCCGCATGAAAGGATGGGAGAAATGGGACTGTCAAGCTGCGAGAAGTGCTTTTCCACGTCTTCAACATCTTTCTATTGATTATTGTTCCAAGCTGAAAGAGCACCTGCCGGTGCCAATTCTTTGTTTCAAGACACTATATATTCGACACTGCAAACAACTTCTGGGGTACGATGGACTGGTGAAAATGAATGGGAATTGGCTCACTCTTTTTCAAGTACACAACATGGAGGCATGGTTTGTGGAATGGGTTGGAAAAATGATATCTCATCCTTCTCTTGAAGACTTGAAAGTTTATTCTTTCCCGAATATGAATATTTCCATGAGTCGGCACTATGATTTCCTTGTAACGTTGACCATTCATGACAGCTGTGACTCTCTAACGACCTTTCCTATAAACTTCTTCCCATCCCTCAGGTCCCTTTATCTCCGGAGTTGTTGTAATCTGCAGATGATTTTACAGGTACATGCTCATGATCATCTCCAGGACCTGACAATCTGTGAGTGTCCCCAATTTGAATCATTGCCTGAACAAATGCATATCCTCCTTCCATCTCTTGAATTCCTAAGCATACGAGATTGCCCCAAAGTTGAGTCGTTCTCTGATGGATGTTTGCCATCAAATATAAAAAGGATGTATCTCACCAATTCCTCCAAACTTATTGCCTCACTGAAAGGGTCTTTTGGAGACAATCCCTCTCTGGAAACCTTGTTTATTGGAAAGCTGGATGCACAGTCTTTTCCTGATGAAGGTTTTCTTCCACTCTCTCTTACTTCTCTACGGATCTATGATTGTCAACATCTTAAAAAACTGGACTTCAAGGGTCTCTGTCACCTCTCCTCTCTCAAGGAATTGTTTCTTGTTAACTGCCCCAGCCTCCAATGCTTACCAGACGAGGGTCTTCCCAAATCCATTTCATATCTTACCATTTCAGGCAACTGTCCGTTGCTCAAACACCGTTGTCAACAACCGAGAGGCGAAGACTGGAGAAAGATTGCTCATGTTGAAAACCTATCTATTTTATAA 3576 0.4049 MAATLVGGSLLSAFLQVAFDRLASPQVLDFFRARKLDQKLLRKLKWKLRSIDALADDADLQQFKNQRVKAWLADVKDALFEAEDLLDEIYEFSIHEVEAESQRTDNKVWNLNFPISSVSFFKNESEIETRMSQVLDDLDELANEGSRLGLKEASGVRVGIGVGSGSDSKVSQKSSSTSLLSESDDIYGRDDDKDIIFNWLTPDTDYGDKLLILSIVGMGGLGKTTLAQHVYHEPRLEGRFDIKAWVCVLDDFDVFKVTRTILEAITKSTDDSRNLEMVQGRLKEIMTGKRFFLVLDDVWNESLSKWEQVQKALDSGAHGSRILVTTRSKKVALSMRSEEHHLKELQEDYCWQLFAKHAFQNDTRQPNTDCKEIGMKIIERCKGLPLALKTMGSLLHNKSSVSEWKNVLKSEVWELEDSDVIPALALSYDHLPSHLKRCFAYCALFPKGYEFDRECLIQLWMAENFLQCHQHTKSLEEIGEQYFNDLLSRSSFQQSNRYKTCFLMHDLLNDLAKYVCEDICFRLGVDKAKGIPKTTRHFTFATNHVEYFDGFGSIHDVERLHTFMPTDWSWHCKMSIDDLLCKFKFLRVLSFSNCSNLTKVPDSLVNLKHLRSLDLSNTHIEKLPESTCSLYNLQILKLNNCPLIKELPSNLHELTNLRRLEFIDTELTKMPEHLGKLKNLQVLMSSFDVGKNREFSIQQLGQLDHHGRLSIGELQNIENPSDALAVDLKNKSHLAGLKLKWNRDQDPDDSLKERDVNVIENLQPSKNLEKLSISHYDGTKFPTWLGDHSLLNVVSLSLFQCKYCQCLPSLGHLPFLKDLTISGVDGVKAIHADFYGSNSCSFTSLETLMFSRMKGWEKWDCQAARSAFPRLQHLSIDYCSKLKEHLPVPILCFKTLYIRHCKQLLGYDGLVKMNGNWLTLFQVHNMEAWFVEWVGKMISHPSLEDLKVYSFPNMNISMSRHYDFLVTLTIHDSCDSLTTFPINFFPSLRSLYLRSCCNLQMILQVHAHDHLQDLTICECPQFESLPEQMHILLPSLEFLSIRDCPKVESFSDGCLPSNIKRMYLTNSSKLIASLKGSFGDNPSLETLFIGKLDAQSFPDEGFLPLSLTSLRIYDCQHLKKLDFKGLCHLSSLKELFLVNCPSLQCLPDEGLPKSISYLTISGNCPLLKHRCQQPRGEDWRKIAHVENLSIL 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00063 1191 SUPERFAMILY L domain-like 940 1183 - -
Spst11g00063 1191 Gene3D Ribonuclease Inhibitor 554 925 IPR032675 -
Spst11g00063 1191 Gene3D - 164 344 IPR027417 -
Spst11g00063 1191 PANTHER DISEASE RESISTANCE PROTEIN RP 41 879 IPR044974 GO:0006952
Spst11g00063 1191 Coils Coil 124 144 - -
Spst11g00063 1191 Gene3D - 345 432 IPR042197 -
Spst11g00063 1191 SUPERFAMILY L domain-like 504 906 - -
Spst11g00063 1191 ProSiteProfiles Leucine-rich repeat profile. 609 630 IPR001611 GO:0005515
Spst11g00063 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 442 IPR027417 -
Spst11g00063 1191 FunFam Probable disease resistance protein At1g63360 428 514 - -
Spst11g00063 1191 Pfam NB-ARC domain 191 410 IPR002182 GO:0043531
Spst11g00063 1191 SMART LRR_typ_2 607 630 IPR003591 -
Spst11g00063 1191 SMART LRR_typ_2 654 677 IPR003591 -
Spst11g00063 1191 Pfam Rx N-terminal domain 11 89 IPR041118 -
Spst11g00063 1191 Gene3D - 32 129 - -
Spst11g00063 1191 PRINTS Disease resistance protein signature 212 227 - -
Spst11g00063 1191 PRINTS Disease resistance protein signature 285 299 - -
Spst11g00063 1191 PRINTS Disease resistance protein signature 381 395 - -
Spst11g00063 1191 PRINTS Disease resistance protein signature 605 621 - -
Spst11g00063 1191 Gene3D Ribonuclease Inhibitor 926 1170 IPR032675 -
Spst11g00063 1191 FunFam Probable disease resistance protein At1g61300 168 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00063 Spst-Chr11 1242698 1246273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00063 213 680 WRKY Transcription Factor Family AT5G45050 22.509 1.16e-11 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00063 - - gmx:100781012 1400.96