Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00047 ATGAAGACCTCTTTTGTTGTGTTGGTTCTGCTTGTTCTTTCCGTTGGAATTGAAAATGAAGGAGGACTGAAAGTGGTCGAGGGAAAAGTATGCGAAGTGAAATTGTATGACTTCTGTGATAGTGATATTTGTTTCGTGGATTGCCCCAAGTCTTCTCCCCACGAGAACAGTTTTGATTTCAAATTTGTTGGAAAAATGTTGGAACTACCATTCAACATGGCACTGCGGTTCCCGAATTTGGATTTGAAGTGTGTGCCCTTTGGCGAGAACCTAAACCCTGAAGTGCTTGGTGGCCTAGTTACTCTTGTTGCTCTTGGCTTTACTGCTGCATATATCAGATATCGCACCAAACACCCCAAAGGATGCTTGGACCCACAAAATTTCAAAGAATTCAAACTGATAAAGAAGACTCAGCTGAGCCACAATGTTGCAAGATTCAGATTTGCCCTTCCTACTCCTTCTTCTGTATTGGGTCTTCCTGTTGGGAAAAACATACTTGCTAGGGGAAGAGATAGCAAAGGAGAGGAAGTTATGAGATCATATACTCCAATCACGTTGGATTCAGATGTTGGCTACTTCGAGTTGGTTGTCAAGATGTACCCAAATGGAAAAATGTCCCACCATTTTAGACAAATGAAAGAAGGTGATTATTTGGCTGTGAGGGGCCCCAAGGGACGTTTCACTTACGTAGCTGGGCAAGCTAGGGCATTTGGAATGCTTGCTGGAGGGTCAGGCATAACTCCAATGTTTCAGCTGATAAGAGCCATTTTAGAAAACCCTAAGGACAAAACAAAGTTGCACCTCATTTATGCCAATGTAACAGTCGACGACATTCTGTTGAAGGAAGAACTAGATAAGTTTGCAGAAAATTTTCCAGACAGATTTGAAGTCTATCATGTTCTTAATAAGCCTCCTCCCCAATGGAATGGTGGCATTGGGTATATTACTAAAGAGATGATTCAATCACATTTCCCTGAACCAGCCCAAGATATTCAGATACTTAGATGTGGTCCACCAGCTATGAACAGAGCCATGGCTACTCACCTTGACGCCCTTGGCTACACACAAAGAATGCAGTTCGAGTTCTAA 1089 0.4252 MKTSFVVLVLLVLSVGIENEGGLKVVEGKVCEVKLYDFCDSDICFVDCPKSSPHENSFDFKFVGKMLELPFNMALRFPNLDLKCVPFGENLNPEVLGGLVTLVALGFTAAYIRYRTKHPKGCLDPQNFKEFKLIKKTQLSHNVARFRFALPTPSSVLGLPVGKNILARGRDSKGEEVMRSYTPITLDSDVGYFELVVKMYPNGKMSHHFRQMKEGDYLAVRGPKGRFTYVAGQARAFGMLAGGSGITPMFQLIRAILENPKDKTKLHLIYANVTVDDILLKEELDKFAENFPDRFEVYHVLNKPPPQWNGGIGYITKEMIQSHFPEPAQDIQILRCGPPAMNRAMATHLDALGYTQRMQFEF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00047 362 Pfam Oxidoreductase FAD-binding domain 131 229 IPR008333 -
Spst11g00047 362 SUPERFAMILY Riboflavin synthase domain-like 120 230 IPR017938 -
Spst11g00047 362 FunFam NADH-cytochrome b5 reductase 121 220 - -
Spst11g00047 362 PRINTS Cytochrome B5 reductase signature 179 186 - -
Spst11g00047 362 PRINTS Cytochrome B5 reductase signature 276 287 - -
Spst11g00047 362 PRINTS Cytochrome B5 reductase signature 215 229 - -
Spst11g00047 362 PRINTS Cytochrome B5 reductase signature 238 257 - -
Spst11g00047 362 PRINTS Cytochrome B5 reductase signature 157 168 - -
Spst11g00047 362 PRINTS Cytochrome B5 reductase signature 332 340 - -
Spst11g00047 362 Pfam Oxidoreductase NAD-binding domain 239 345 IPR001433 GO:0016491
Spst11g00047 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 276 287 IPR001709 GO:0016491
Spst11g00047 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 238 257 IPR001709 GO:0016491
Spst11g00047 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 332 340 IPR001709 GO:0016491
Spst11g00047 362 Gene3D Translation factors 121 219 - -
Spst11g00047 362 Gene3D - 220 362 IPR039261 -
Spst11g00047 362 PANTHER NADH-CYTOCHROME B5 REDUCTASE 118 362 IPR001834 GO:0016491
Spst11g00047 362 CDD cyt_b5_reduct_like 131 362 - -
Spst11g00047 362 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 126 230 IPR017927 GO:0016491
Spst11g00047 362 FunFam NADH-cytochrome b5 reductase 220 362 - -
Spst11g00047 362 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 218 356 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00047 Spst-Chr11 806582 813860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00047 111 362 NADPH P450 reductases AT5G17770 67.460 1.51e-131 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00047 K00326 - gmx:100809584 528.094