Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00038 ATGGGGACCCAAACGATGGGCTCTCAAGGAGGTGATGGAGATAGTAATGGAAAACAGTCACAAGGCCAGCCTTTGGTGCGACAAAACTCAATGTACAGTCTCACACTTGATGAGGTTCAGAATCAATTGGGCGATTTGGGGAAGCCGCTAAGTAGTATGAATCTGGATGAGCTTCTAAAAAATGTGTGGACCGTGGAGGCAAACCAGACCATTGGTATGGACAATGAGGGCACAGCACAGGCTAGTCAAGCTGTTCTGCAGCGTCAGGCTAGTCTGTCGCTAACTGGTGCACTAAGCAAGAAGACCGTGGATGAGGTTTGGAAAGATATTCAACAAAACAAAATCATTGAGGAGAAGAGGTTCCGAGACAGACAGCCTACTTTAGGAGAAATGACATTGGAGGACTTCTTGGTGAAAGCTGGAGTTGTTGCAGAAGCAGCTTCTAATCGAAAGAATACTGGTACTGTTGCTGGGGTTGATTCAAGCATGACAGTACCTCAGTTTCCTTCTCAAGGACAATGGATACAATATCCACAAGCACAATATCAGCATCCACAACAAAGTTTAATGCAGATTTATATGCCTGGCCAGGGTCTGGCACAACCATTACACTTGGGAGCTGGAGCTTCATTGGATGTTTCGTTTGCAGATAATCAGGTGGCATTGCCATCCCCTCTGATGGGAACAGTGTCAGATACGCAGACTCCTGGAAGAAAAAGGAACACTCCTGAAGACATGATGGAGAAGACTGTTGAGAGGAGACAGAAAAGGATGATTAAAAATCGAGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCTTACACAAATGAATTGGAGAATAAAGTCTCGCGTCTGGAAGAGGAAAATGAAATGCTGAGGAAACGAAAGGAGCTAGAGAAGCTGTTGCCATGTACACCACCTCCTGAACCAAAGTATCAACTTCGCCGAATAGGATCAGCTCCATTCTGA 972 0.4568 MGTQTMGSQGGDGDSNGKQSQGQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVEANQTIGMDNEGTAQASQAVLQRQASLSLTGALSKKTVDEVWKDIQQNKIIEEKRFRDRQPTLGEMTLEDFLVKAGVVAEAASNRKNTGTVAGVDSSMTVPQFPSQGQWIQYPQAQYQHPQQSLMQIYMPGQGLAQPLHLGAGASLDVSFADNQVALPSPLMGTVSDTQTPGRKRNTPEDMMEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENEMLRKRKELEKLLPCTPPPEPKYQLRRIGSAPF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00038 323 Coils Coil 269 303 - -
Spst11g00038 323 CDD bZIP_plant_BZIP46 253 307 - -
Spst11g00038 323 Pfam bZIP transcription factor 253 298 IPR004827 GO:0003700|GO:0006355
Spst11g00038 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 251 296 IPR004827 GO:0003700|GO:0006355
Spst11g00038 323 PRINTS cAMP response element binding (CREB) protein signature 248 264 - -
Spst11g00038 323 PRINTS cAMP response element binding (CREB) protein signature 266 286 - -
Spst11g00038 323 PRINTS cAMP response element binding (CREB) protein signature 162 177 - -
Spst11g00038 323 PRINTS cAMP response element binding (CREB) protein signature 286 303 - -
Spst11g00038 323 Gene3D - 251 304 - -
Spst11g00038 323 MobiDBLite consensus disorder prediction 225 323 - -
Spst11g00038 323 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 322 IPR043452 GO:0003700|GO:0045893
Spst11g00038 323 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 251 303 - -
Spst11g00038 323 SUPERFAMILY Leucine zipper domain 253 298 IPR046347 GO:0003700|GO:0006355
Spst11g00038 323 MobiDBLite consensus disorder prediction 1 25 - -
Spst11g00038 323 SMART brlzneu 249 317 IPR004827 GO:0003700|GO:0006355
Spst11g00038 323 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 256 271 IPR004827 GO:0003700|GO:0006355
Spst11g00038 323 MobiDBLite consensus disorder prediction 238 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00038 Spst-Chr11 718122 721279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00038 18 323 bZIP Transcription Factor Family AT3G56850 56.869 1.47e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst11g00038 bZIP_1 2.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00038 K14432 - gmx:100101875 531.946