Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00032 ATGTCATCCCCAACAATGTTCATTCTATTCCTCCTTTTTCTCTCCATCCTAGCACCATTACACTTGGCTCAAGCTCCATCACCATCTTCAATACTTGCCCCACCACCATCTCCAAAACATGCCCCTCCAACATCTCCAAAACATTCCCCTCCTCCTCCTTCTTCTTCTTCACCACCACCACCACCACCACCAAAATATGCCCCGCCTCCTCCTTCTTCTCCACCACCATCTCCAGCACATGCTACTCCTCCTTCTCCATCACCATCTCCAACGCATGCTACTCCTCCACCACCATCTCCAACGCATGCTACTCCTCCTTCTCCATCACCATCTCCAACGCATGCTACTCCTCCTTCTCCATCACCAACGCATGCTACTCCTCCTTCCCCATATCCAACGCATGCTACTCCTCCTTCTCCATTACCAACACATGCTCCTTCTCCTTCTCCATCACCATCTCAAACTCATGCTCCTTCTCCATCTCCATCATCTTCTCAAACTCATGCTCCTTGTTCTTCTCCATCACCCTCTCCAACACATGCCCCACCGCCACCTCTTCCACCTACTTCACCCTCTTCAGCATGCAAGGCCACATTATATCCAAAACTATGCCGTTCCATTCTCTCATCCATTCGTTCCTCACCTTCTGACCCTTACAACTTGGGCAAGTTCTCCATCAAACAAAGTCTCAAACAAGCCAAGAAACTTGTCAAAGTTTTTGCCGACTTCCTCAAAAAGCACCAATCTTCTTCTCTCAACAGCGCAGAGATTGCAGCCCTAGAAGACTGCAGTGAGCTCAACCAGCTCAATGTTGGCTACTTGGAGTCAGTTTCAGAAGAGCTGAAATCTGCAGACTCATCCAACACAGAGTTGGTTGAAAATATTGAAACATATCTCAGTGCTGTGGCCACTAACCATTACACTTGCTATGATGGGTTGGTGGTGATCAAGAGCAGCGTTGTCAATGCTCTTGCTGTACCTCTCAACAATGTTACAGAACTCTATAGTGTGTCACTTGGGTTGGTCACGCAAGCTCTGAAGAAGAATCTCAAGAAGCATAAGACTCGCAAACATGGTCTACCCACCAAAGATTACAAGGTCAGACAGCCACTGCAGAAGCTCATCAAGCTTCTTCACACAAAGTACAGTTGCCCAACATCATCCAATTGCAGTAGTAGAAGTGAAAGGATTTTAAAAGAAACTGAGAACAAAGGAATTCTACTTAAAGACATTGTGATTGTGAACCTTGATGGTAGAGACAACTTCACCTCCATTGGAGAGGCTATTGCCGCTGCACCAGATAATTTAAGGCCAGAAGATGGCTATTTCCTTATCTATGTCAAACAAGGATCCTATGAGGAATATGTCACTGTTCCATTTCAGAAGAAGAATATCTTGCTTATTGGTGATGGTATCAACAAAACTTGCATCACAGGAAACCATAGTGTAGTAGATGGTTGGACCACTTTCAATTCTTCAACCTTTGCTGTCTCGGGAGAAAGATTCGTTGCAGTTGATGTTACATTCAGAAACACAGCTGGCCCTCAGAAGCACCAAGCAGTGGCTGTGAGGAATAATGCAGACCTCTCTACATTCTATCGTTGCAGTTTTGAAGGATATCAAGACACTCTCTATGTCCACTCTCTCAGGCAATTTTATAGGGAATGTAACATTTATGGCACTGTGGATTTCATTTTTGGAAATGCTGCTGTGGTGTTCCAGAGCTGCAATATCTATGCCAGAAAACCATTGCCAAATCAGAAGAATGCAATCACAGCACAAGGGAGAACTGACCCCAATCAAAACACTGGAATTTCAATACAGAATTGCAGGATTGAGGCTGCATCTGACTTGGCTTTGGAATCAACTGAAAATTACTTGGGCAGGCCATGGAAAGTGTACTCAAGGACAGTGTACATGCAATCATATATTGGAGAACTAATTCAGTCTGTTGGATGGTTAGAGTGGAATGGAACAGATGGATTAAACACCCTCTTTTATGGTGAGTTCGATAACTTTGGACCTGGTTCTGATACAAGCAAGAGGGTACAATGGAGTGGTTACAATATACTGACTGCTACACAAGCTTGGAACTTTACTGTGTGTAATTTTACATTGGGGAATACATGGCTTCCAGATACAGATATACCCTATTCTGAAGGACTTTAG 2169 0.4444 MSSPTMFILFLLFLSILAPLHLAQAPSPSSILAPPPSPKHAPPTSPKHSPPPPSSSSPPPPPPPKYAPPPPSSPPPSPAHATPPSPSPSPTHATPPPPSPTHATPPSPSPSPTHATPPSPSPTHATPPSPYPTHATPPSPLPTHAPSPSPSPSQTHAPSPSPSSSQTHAPCSSPSPSPTHAPPPPLPPTSPSSACKATLYPKLCRSILSSIRSSPSDPYNLGKFSIKQSLKQAKKLVKVFADFLKKHQSSSLNSAEIAALEDCSELNQLNVGYLESVSEELKSADSSNTELVENIETYLSAVATNHYTCYDGLVVIKSSVVNALAVPLNNVTELYSVSLGLVTQALKKNLKKHKTRKHGLPTKDYKVRQPLQKLIKLLHTKYSCPTSSNCSSRSERILKETENKGILLKDIVIVNLDGRDNFTSIGEAIAAAPDNLRPEDGYFLIYVKQGSYEEYVTVPFQKKNILLIGDGINKTCITGNHSVVDGWTTFNSSTFAVSGERFVAVDVTFRNTAGPQKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECNIYGTVDFIFGNAAVVFQSCNIYARKPLPNQKNAITAQGRTDPNQNTGISIQNCRIEAASDLALESTENYLGRPWKVYSRTVYMQSYIGELIQSVGWLEWNGTDGLNTLFYGEFDNFGPGSDTSKRVQWSGYNILTATQAWNFTVCNFTLGNTWLPDTDIPYSEGL 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00032 722 MobiDBLite consensus disorder prediction 26 193 - -
Spst11g00032 722 Coils Coil 274 294 - -
Spst11g00032 722 NCBIfam pectinesterase inhibitor domain 193 344 IPR006501 GO:0004857
Spst11g00032 722 MobiDBLite consensus disorder prediction 158 174 - -
Spst11g00032 722 PANTHER PECTINESTERASE 192 712 - -
Spst11g00032 722 FunFam Pectinesterase 406 722 - -
Spst11g00032 722 Pfam Plant invertase/pectin methylesterase inhibitor 192 340 IPR006501 GO:0004857
Spst11g00032 722 ProSitePatterns Pectinesterase signature 2. 558 567 IPR033131 -
Spst11g00032 722 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 193 344 IPR035513 -
Spst11g00032 722 CDD PMEI-like_3 195 343 - -
Spst11g00032 722 MobiDBLite consensus disorder prediction 29 157 - -
Spst11g00032 722 SUPERFAMILY Pectin lyase-like 409 721 IPR011050 -
Spst11g00032 722 Gene3D Invertase/pectin methylesterase inhibitor family protein 191 345 IPR035513 -
Spst11g00032 722 Gene3D - 407 722 IPR012334 -
Spst11g00032 722 MobiDBLite consensus disorder prediction 175 191 - -
Spst11g00032 722 Pfam Pectinesterase 412 707 IPR000070 GO:0030599|GO:0042545
Spst11g00032 722 SMART PMEI_2 186 341 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00032 Spst-Chr11 600356 608014 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00032 194 722 Carbohydrate Esterase AT3G10720 61.754 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00032 K01051 - gmx:100808277 946.806