Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00031 GTGTTTGGGAAGAATTTCATTGCTAGGGATATGGGATTTAGAAACACAGCTGGTCCAGAGAAGCACCAGGCAGTGGCACTGTTGACAGCTGGTGATCAAGCAGTTTATTATAGGTGCCAAATTGAAGCCTTTCAGGACAGTCTCTATGCACATTCCAACCGCCAATTCTACAGAGAATGCAACATTTATGGCACAGTTGATTTCATTTTTGGCAATTCAGCAGTTGTCCTCCAAAACTGCAACATTTTCCCAAGGGTGCCTATGCAGGGCCAGCAGAACACCATAACAGCACAGGGCAAAACTGACCCCAACATGAACACAGGAATTTCAATTCAAAATTGCAGCATTGCACCCTTTGGGGACTTAAGCTCTGTGCAAACATACCTTGGAAGACCGTGGAAGGACTACTCAACCACAGTGTTCATGCAGTCCACATTGGGGAGTTTCATTAACCCAGATGGATGGTTACCATGGGTAGGGAACTCAGCACCAGATACCATATTTTATGCAGAATTTCAGAATGTTGGACCTGGAGCTTCAACAAAAAATAGGGTGAAGTGGAAGGGTTTGAAAACCATTACACATAAACAAGCTAGCATGTTTACTGTCAAGTCTTTTCTTTCAGGGGACAAATGGATTCCAGCTTCGGGTGCCCCCTTTACATCTTCTATGTGA 675 0.443 VFGKNFIARDMGFRNTAGPEKHQAVALLTAGDQAVYYRCQIEAFQDSLYAHSNRQFYRECNIYGTVDFIFGNSAVVLQNCNIFPRVPMQGQQNTITAQGKTDPNMNTGISIQNCSIAPFGDLSSVQTYLGRPWKDYSTTVFMQSTLGSFINPDGWLPWVGNSAPDTIFYAEFQNVGPGASTKNRVKWKGLKTITHKQASMFTVKSFLSGDKWIPASGAPFTSSM 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00031 224 ProSitePatterns Pectinesterase signature 2. 62 71 IPR033131 -
Spst11g00031 224 Gene3D - 1 224 IPR012334 -
Spst11g00031 224 FunFam Pectinesterase 4 1 224 - -
Spst11g00031 224 PANTHER PECTINESTERASE 2 214 - -
Spst11g00031 224 SUPERFAMILY Pectin lyase-like 1 221 IPR011050 -
Spst11g00031 224 Pfam Pectinesterase 2 210 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00031 Spst-Chr11 599153 599829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00031 1 224 Carbohydrate Esterase AT3G10710 66.964 5.17e-117 343