Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00014 ATGTCTGAAGAACCACTGGGTATTGTGGTGATCCACTATGCATCAAGAGACTTCAATACAAATGCCATAAAAGTGGTCCTGCAGGGATTTTCACTTGGTCGTGGAGACAAGCTTACACTTCTCGTAATTCTTCGCCATGCTAATAGTCCCACTAGGATTCCCTTCATTGCACCTGCCAGATTGCGTGGATTATTTGAGACTGATCACAAAATTATTGAGGAAGAGATTGCCAAGAAGAGAGAAGAGCTCCTAAATAATGCAAGCATAAGGGAAATTTCTGAACAGTGTGAAGCAGACAGGATCCAGTTCCAGATAGAAGTTCTTCAAGGCAATTTACCAGAGATTGCTGTAAATGCTGCCTTCCGTTTGGAGGCAACATCAGTGATACTTGATAGACATATGAAGAAATATAAGAAGGATTTCAAGCAGAGTCTCTCTTGTTCTTTGCTAATAATGAAACGTGACAACTCGATGAAACACTTGAGAGGGCCAAGGGAATCACATCTGTGCGATAGAAGCAATGGAAATGCAAGATGTGTTAGATGTCCAAATTCTAAATCTCCACCAAAAATACAGCAAGTGGCAAATGCAATTTTCTGCTCCAATACCAGTTCTTCATTTCCTACTATTCCAAAGGTCATGTGCCCCCAAATTTATTCTCAAATAAAACAAAACCCAGAAAATAGAGAACAAGACATGGCAAGAGGGTATTGCCTATTACCCATTACTGCTCAAAAGACTAATCACACTGAAGTGCATCACATAGAAATACCAGTGGAACATAGAAATAACCATGAAGCATATCAAATAGTTGAACAATTCAAAAATTCGGTTTGCTCAGTATGCAAGAACAGAAGACCAAAATTTGAAGTGATGAAAGAATTCACATATGCGGAGCTGTATGAAGCTACACAAGGTTTTTCGCCAAAAAACTATTTGTCAGAAGGTGGATTTGGTTCTGTCTATAAAGGAATTCTGCAAGGAGGACTAAGGATTGCTGTAAAGCAACATAAGTGTGCAAGCCACCAAGGAGAGAAGGAATTCAAATCTGAGGTCAATGCACTCAGCAGAGCTATACATGAGAATGTCGTCATGCTGCGTGGATCATGTTCAGAAGGAAATAACAGGCTTCTTGTGTACGAATTTGTTTGCAATGGCTCTCTTGACCAACATTTATCACAACACTCACGTAAACCTCTTACTTGGCCAGAAAGGATCAAAGTAGCTATTGGAGCTGCAAAAGGCTTACTGTATTTGCATCAAAACAATATAATACACCGAGATATGAGACCTAGCAACATCCTTATTACACATGATTATGAAGCAATGCTTGGAGATTTTGGTCTGGCTAGAACTGAACAAATGGACTCCTTATACTCCACAGATGTTGTTGGAACAATAGGGTATTTGGCACCAGAATATGCAGAATCAGGAAAAATGTCAACCAAGACAGATGTGTATTCTTTTGGTGTAGTTCTTCTTCAGCTAATAACTGGAATGAGGACTGTAGACAAACGTCTTGGCGATAAAAGTCTTGTGGGATGGGCAAGGCCACTACTTAAAGATAGGAACTATCCAGATCTAATTGATGAAAGGATGATGGATAATCATGATTGCCATCAGCTTTTCTGGATGATTCGTCTAGCAGAAAAATGTCTCAGCAGGGATTCTCAGAGGCGATTATCAATGGATACAGTGGTCATTGCCTTAACTCATATACTGGAAGGCAACACATGCAGTGTTGTACTGAGAGACTGCTCTCCAGCACGGTCAGATTCATCTTATGACATGTCAGATATCTCTCAGGAGAGTGAAGGTGAAGATGCAAGCATCTATGGAGAATATGCTCCTATATGCTTAAGACCTCCACCTTCTCCTCCATTAGGAAGCACTTCATCAAGTACATCAAGCATGTTCACAGGGCTGAGCGAATCTCCTTCTGATGACTTGTCCAATAATGAGAATAAGGGTAAAGGTATTCTAAACCATTATGGTCTTGTTTGA 2004 0.4022 MSEEPLGIVVIHYASRDFNTNAIKVVLQGFSLGRGDKLTLLVILRHANSPTRIPFIAPARLRGLFETDHKIIEEEIAKKREELLNNASIREISEQCEADRIQFQIEVLQGNLPEIAVNAAFRLEATSVILDRHMKKYKKDFKQSLSCSLLIMKRDNSMKHLRGPRESHLCDRSNGNARCVRCPNSKSPPKIQQVANAIFCSNTSSSFPTIPKVMCPQIYSQIKQNPENREQDMARGYCLLPITAQKTNHTEVHHIEIPVEHRNNHEAYQIVEQFKNSVCSVCKNRRPKFEVMKEFTYAELYEATQGFSPKNYLSEGGFGSVYKGILQGGLRIAVKQHKCASHQGEKEFKSEVNALSRAIHENVVMLRGSCSEGNNRLLVYEFVCNGSLDQHLSQHSRKPLTWPERIKVAIGAAKGLLYLHQNNIIHRDMRPSNILITHDYEAMLGDFGLARTEQMDSLYSTDVVGTIGYLAPEYAESGKMSTKTDVYSFGVVLLQLITGMRTVDKRLGDKSLVGWARPLLKDRNYPDLIDERMMDNHDCHQLFWMIRLAEKCLSRDSQRRLSMDTVVIALTHILEGNTCSVVLRDCSPARSDSSYDMSDISQESEGEDASIYGEYAPICLRPPPSPPLGSTSSSTSSMFTGLSESPSDDLSNNENKGKGILNHYGLV 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00014 667 ProSitePatterns Tyrosine protein kinases specific active-site signature. 424 436 IPR008266 GO:0004672|GO:0006468
Spst11g00014 667 Gene3D Phosphorylase Kinase; domain 1 267 382 - -
Spst11g00014 667 FunFam Proline-rich receptor-like protein kinase PERK8 269 382 - -
Spst11g00014 667 Pfam Protein tyrosine and serine/threonine kinase 311 567 IPR001245 GO:0004672|GO:0006468
Spst11g00014 667 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 383 585 - -
Spst11g00014 667 MobiDBLite consensus disorder prediction 623 657 - -
Spst11g00014 667 SUPERFAMILY Protein kinase-like (PK-like) 292 589 IPR011009 -
Spst11g00014 667 CDD STKc_IRAK 313 567 - -
Spst11g00014 667 ProSiteProfiles Protein kinase domain profile. 307 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00014 667 PANTHER OS01G0750732 PROTEIN 227 594 - -
Spst11g00014 667 MobiDBLite consensus disorder prediction 630 657 - -
Spst11g00014 667 Gene3D Transferase(Phosphotransferase) domain 1 383 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00014 Spst-Chr11 246154 251053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00014 295 584 Trihelix Transcription Factor Family AT5G38560 46.689 3.93e-82 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Spst11g00014 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00014 - - vum:124838318 1105.12