Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00008 ATGCAGGCTTGGGACATATGGTGTGCTGGAAGATGTTTGGAATTGATGGATCCAACCCTGATCAAATCCTTCATAGCTAGTGAAGTTTTCAAGTGCTTACACATTGGTTTGCTGTGTGTTCAACAAGATGCAGCAGATAGACCAACCATGTCCACTGTTGTTCTAATGCTAGGAAGTGACACAATGACCCTTCCAAGACCCAACCATCCTGCATTTTCTGTTGGAAAATTGACCCCTAAAGAAACCTCAACTTCAGGAAGTTTCAAGAATCCTTCTATTAATGATGTAACAGTCTCAGCCCTTTTAGCAAGAATACTCATTATAAAGGCACAAACACAGACATATCTGGGAAGTAATTGCCAAAACACCACCCAAGAACATCTCAGCAGTGCATACCAAACAAATCTTGATAAAATCCTCACATGGATGTCCTCTGATGCATCCACAAGCAGAGGCTATAACCATACCAGCATAGGCATCAACTCCACAGTGTATGGCCTCTATGATTGCCGTGGTGATGTTGTTGGATACTTTTGTCAATTCTGTGTCTCCTTCGCAGCCAGAGAAGCCCCTAAACGCTGCCCCAATAGCGTATCTGCTATGGTGTGGTATGAGTACTGCATTCTAAGGTACTCTAATGAGAAATTCTTTGGGGACATTCTCACACACCCCACGTGGCATGGGGTTGGAACAAAAAATGTATCCAACATGGCAGAGATTAAAAAAGGTGAGGGTTTTGTAAGAAGTTTAATCAGAAAAGCAGCTACGGAGACAAACCAGTTGTACTATTTGGGTGGCTTCAGTTTGAGTTCCACTCAGAGAAGGTATGGTATGGTGCACTGCAGTAGAGATCTCACAAATGAAGGGTGCACAGAGTGTTTGGAGGCTGTATTAGCACAAGTTCCCAAATGTTGTGAACAGAAAATAGGATGGTTTATTTGGTCTGGAACTTGCATGATAAGGTATGATGATCAAATGTTCTACCTTCTGAACAACCAAACATCTTCACTTACTGAGCCAAATCTGCAAACAGTGTATATCGCTTCTGGTACAGGAGAAGAGTTAGAAAAGAGTACTGATAACTTTTCAGAAGCATCAAAATTAGGGGAAGGAGGATTTGGCAATGTTTACAAGGGAATTCTAGCTGATGGAACACAAATTGCAGTCAAAAGGCTGTCAAAATTTTCTGGTCAAGGCTCAGAGGAATTCAATAATGAAGTAATGTTTATAGCTAATCTGCAACATCGCAACCTTGTGAGACTTTTGGCATATTGCTTGGACGAAAATGAAAACATACTAGTGTACGAGTATTTGCCGAATAAAAGTCTAGACTTTCACCTCTTTGATGGTGAGAAGAGAAATCAGTTCGATTGGAAACTAAGATTAAGGATTATAAATGGAATAGCAAGAGATTTTGGATTGGCAAGGGCATTTGAAATAGGACAGAAACAGGCAAACACAAAACGAGTAATGGGAACTTATGGATACATGGCACCAGAGTATGTTATGCAAGGACTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGGGCTGAAGCACAGACAAACCTGGGAGGTAACTGCGGAAACGGCACCCAACAAAATCTCAGCAGTGCATACCAAACCAACCTTGACAAAATCCTCACATGGATGTCCTCCGATGCAGCCACAAGCAATGGTTATAACCACACCACCATAGGCACCAATAGCTCTGCGTATGGCCTCTATGATTGTGGTGGTGGCGTGGTTGGATACTTTTGTCAATTTTGTGTTTCCACTGCTACAAAAGAAGCCGCTCAGCTCTGCCCCAGTAATGTATCTGCTCTGGTGTGGAATGATTACTGCGTTATAAGGTACTCAAATGAGGACTTCTTTGGGAAAGCTTTGACATACCCAACATGGCATACTGTTGGAACAAAAAACGTATCCAACATTACAGAGATTCAGAAAGGTGAGGATTTTGTGAGAAGTTTGATAAGAAAAGCAACTAATGAAAGCAACCTGTTGTACTATAAGGACGGCTTCAATTTGAGTGCCACTGAGAGTAGGTATGGCGTGGTGCAATGCACTAGAGATCTCACAAATGAAGGGTGCCGACAGTGTTTGGAGGACATACTAGCTGAAGTTCCCACGTGCTGTGAACAAAAAGTAGCATGGATGGTTTGGTCCGGAAGTTGTTTGATAAAGTATGATGATCACATATTCTACCTTCTTAACCAACCACCTTCAGCTCCTGCACCCGATCAGCAAACAGAAGGTATTCCTCTACCTTCATTTCATAAATTTCAATCAGAAGAAACGTGGAACACCGACCTGCCTAGAATCCCATTAATCACAATTCTACAGAGTACTGATAAATTTTCAGAAGCATCTAAATTAGGGGAAGGTGGATTCGGCCCTGTTTACAAGGGAACTCTACCAGATGGAAGACAAATTGCAGTCAAAAGACTCTCAAAATTTTCTGGTCAAGGTTCGGAGGAGTTCAATAATGAAGTAATGTTTATAGCTAAATTGAGGCATCGCAACCTTGTAAGACTGTTGGCATGTTGCTTAGAGGAAAATGAAAAGATACTTGTATACGAGTATTTGCCGAATAAAAGTCTCGACTTTCACCTATTTGGTATGTTTTCAAATAGCAGTGTTGCTTTTACTGCAATTTGTTCTTCTGCATTCTCCACTACAAAAATAGTATTGGCTCACAAGTCAGTTGGGGAAACTGTGGAGCTTAATGTAGTTGTCCTGGCATATGTTGAGAAAAGAAAACAATTTTATTGGAAACTAAGATTAAGCATTATCAATGGAATAGCAAGAGATTTTGGATTGGCAAGGGCATTTGAAATGGGACAGAACCAGGCAAATACAAAACGAGTAATGGGCACATATGGATACATGGCTCCTGAGTATGCAATGGAAGGGCTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGCGGGAGAAAGAATGGTGGATTCTACCTGTCAGATGGTCAAACTCTTCTTTTATATGGTTGGAGAAAATGGTGTGAAGGAAAATGTTTGGAAATGATGGATCCAATGCTGGAAAAATCCTTCATAGGCACAGAAGTAGAGAGGTGCATACAGATTGGTTTGTTGTGTGTTCAAGAAGGCCCAAAAGATAGACCAACCATGTCCGATGTTGTTGTAATGCTGGCGAGTGACACAGTGACCCTCCCAAAACCCAAGCACCCAGCATTTTCGGTTGGAAGTATGGCCTCAGAGGAAGTCTCTACATCAAGAAGTTCCAAGAATTTTTCCAATAATGATATAACATCCTCTATTACTTTACCTAGGTAA 3363 0.4101 MQAWDIWCAGRCLELMDPTLIKSFIASEVFKCLHIGLLCVQQDAADRPTMSTVVLMLGSDTMTLPRPNHPAFSVGKLTPKETSTSGSFKNPSINDVTVSALLARILIIKAQTQTYLGSNCQNTTQEHLSSAYQTNLDKILTWMSSDASTSRGYNHTSIGINSTVYGLYDCRGDVVGYFCQFCVSFAAREAPKRCPNSVSAMVWYEYCILRYSNEKFFGDILTHPTWHGVGTKNVSNMAEIKKGEGFVRSLIRKAATETNQLYYLGGFSLSSTQRRYGMVHCSRDLTNEGCTECLEAVLAQVPKCCEQKIGWFIWSGTCMIRYDDQMFYLLNNQTSSLTEPNLQTVYIASGTGEELEKSTDNFSEASKLGEGGFGNVYKGILADGTQIAVKRLSKFSGQGSEEFNNEVMFIANLQHRNLVRLLAYCLDENENILVYEYLPNKSLDFHLFDGEKRNQFDWKLRLRIINGIARDFGLARAFEIGQKQANTKRVMGTYGYMAPEYVMQGLFSVKSDVFSFGVLVLEIIWAEAQTNLGGNCGNGTQQNLSSAYQTNLDKILTWMSSDAATSNGYNHTTIGTNSSAYGLYDCGGGVVGYFCQFCVSTATKEAAQLCPSNVSALVWNDYCVIRYSNEDFFGKALTYPTWHTVGTKNVSNITEIQKGEDFVRSLIRKATNESNLLYYKDGFNLSATESRYGVVQCTRDLTNEGCRQCLEDILAEVPTCCEQKVAWMVWSGSCLIKYDDHIFYLLNQPPSAPAPDQQTEGIPLPSFHKFQSEETWNTDLPRIPLITILQSTDKFSEASKLGEGGFGPVYKGTLPDGRQIAVKRLSKFSGQGSEEFNNEVMFIAKLRHRNLVRLLACCLEENEKILVYEYLPNKSLDFHLFGMFSNSSVAFTAICSSAFSTTKIVLAHKSVGETVELNVVVLAYVEKRKQFYWKLRLSIINGIARDFGLARAFEMGQNQANTKRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGRKNGGFYLSDGQTLLLYGWRKWCEGKCLEMMDPMLEKSFIGTEVERCIQIGLLCVQEGPKDRPTMSDVVVMLASDTVTLPKPKHPAFSVGSMASEEVSTSRSSKNFSNNDITSSITLPR 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00008 1120 ProSiteProfiles Gnk2-homologous domain profile. 638 743 IPR002902 -
Spst11g00008 1120 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 471 529 - -
Spst11g00008 1120 Gene3D Transferase(Phosphotransferase) domain 1 433 532 - -
Spst11g00008 1120 ProSiteProfiles Protein kinase domain profile. 795 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00008 1120 SUPERFAMILY Protein kinase-like (PK-like) 778 1099 IPR011009 -
Spst11g00008 1120 ProSiteProfiles Gnk2-homologous domain profile. 222 327 IPR002902 -
Spst11g00008 1120 ProSiteProfiles Protein kinase domain profile. 362 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00008 1120 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Spst11g00008 1120 Pfam Protein tyrosine and serine/threonine kinase 471 525 IPR001245 GO:0004672|GO:0006468
Spst11g00008 1120 Pfam Protein tyrosine and serine/threonine kinase 799 1072 IPR001245 GO:0004672|GO:0006468
Spst11g00008 1120 Pfam Protein tyrosine and serine/threonine kinase 366 469 IPR001245 GO:0004672|GO:0006468
Spst11g00008 1120 FunFam cysteine-rich receptor-like protein kinase 10 945 1080 - -
Spst11g00008 1120 Pfam Salt stress response/antifungal 661 740 IPR002902 -
Spst11g00008 1120 Pfam Salt stress response/antifungal 248 324 IPR002902 -
Spst11g00008 1120 Pfam Salt stress response/antifungal 120 213 IPR002902 -
Spst11g00008 1120 Pfam Salt stress response/antifungal 536 629 IPR002902 -
Spst11g00008 1120 Gene3D - 640 743 IPR038408 -
Spst11g00008 1120 Gene3D - 533 632 IPR038408 -
Spst11g00008 1120 Gene3D - 226 327 IPR038408 -
Spst11g00008 1120 Gene3D - 112 216 IPR038408 -
Spst11g00008 1120 FunFam Cysteine-rich receptor-like protein kinase 28 116 215 - -
Spst11g00008 1120 ProSiteProfiles Gnk2-homologous domain profile. 530 632 IPR002902 -
Spst11g00008 1120 FunFam Cysteine-rich receptor-like protein kinase 28 533 631 - -
Spst11g00008 1120 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 341 437 - -
Spst11g00008 1120 ProSiteProfiles Gnk2-homologous domain profile. 114 216 IPR002902 -
Spst11g00008 1120 Pfam Domain of unknown function (DUF3403) 59 104 IPR021820 GO:0004674
Spst11g00008 1120 Pfam Domain of unknown function (DUF3403) 1075 1120 IPR021820 GO:0004674
Spst11g00008 1120 Gene3D Phosphorylase Kinase; domain 1 328 432 - -
Spst11g00008 1120 Gene3D Phosphorylase Kinase; domain 1 764 870 - -
Spst11g00008 1120 MobiDBLite consensus disorder prediction 1098 1120 - -
Spst11g00008 1120 SUPERFAMILY Protein kinase-like (PK-like) 339 525 IPR011009 -
Spst11g00008 1120 Gene3D Transferase(Phosphotransferase) domain 1 1 68 - -
Spst11g00008 1120 FunFam Cysteine-rich receptor-like protein kinase 10 760 870 - -
Spst11g00008 1120 Gene3D Transferase(Phosphotransferase) domain 1 922 1081 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00008 Spst-Chr11 106835 115723 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00008 3 86 Receptor kinase-like Gene Family AT4G05200 36.905 5.36e-14 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst11g00008 PK_Tyr_Ser-Thr 3.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00008 - - pvu:PHAVU_011G194300g 914.835