Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00006 ATGGAGGGAAAACAATTCAATGTGAGACCAACATATTCATTTCTTTTTGTGTTTTTGCTAGGCTTCAAACCACTTGTTACAGAGGCACAATCACCCAACTATGCGGGAGATGACTGCAATTCCACCACCCCAAAATCTCTAAGTAATGCATACAAAACCAACCTTAACAATGTCCTCTCATGGCTATCCTTAGATGCAGCAACAAGCAAAGGCTACAACCATAACAGCTTTGGCAACAACACCCCTGGTGCAGATGCTGTTGTGTATGGCCTCTATGATTGCCGTGGTGATGTTGTTGGATACTTTTGTCAGTTCTGCGTGTCCACTGCTTCCAGAGAAATTCTTCAGCGCTGCCTTAATAGGGTATCTGCTATTATATGGTATGATTTCTGCATCATAAGGTACTCTAATGAGAACTTCTTTGGGAATGTTACAGTAGACCCATCATGGAATCGTGTAGGACCAAAAAATGTCTCCAGTGCGGAAGAGATTCGGAAGGGTGAGGGTTTTATGAGAAGTTTGATCAGAAAAGCAACTGTGGAGACCAACCAGTTGTACTACATGGATGGCTTCAATTTGAGTTCCACTCAGAGAAGGTATGGCTTGGTTCAGTGCAGTAGAGATCTCACAAGTGATGGATGCAGAGAGTGTTTGGAGGCCATGTTAGCAAAAGTTCCCAAATGTTGTGAACGTAATTTGGGCTGGCAAGTTTCCACTGCAAGTTGTCTCATAAAGTATGATGACTATATTTTCTACCTTTTTCGCAGTCCAGCATCTTCAGTTTCTGTGCCTGATACACACATAGTGTTTATTGCTTCTGGTTCAGGAAAAGAACTAGAAGAGGAAGAGGTAATTTTCTCTGGGCGTAGTATACCTGATACAATTCGTCTATCATCATATCACAATGTTCAAACTGAGGAAACACTGAACCCGGACCTGCTTACAATACCATTAACCACAATTCTTAAGAGTACTGATAACTTTTCAGAAGCATCTAAGCTAGGGGAAGGTGGATTTGGCCCCGTCTACAAGGGAATTCTGCAGGATGGAAGACAAATTGCAGTCAAACGACTCTCACAATCTTCTGGTCAAGGGTCAGAAGAGTTCAAGAATGAAGTAATGCTCATAGCTAAATTGCAACATCGCAACCTTGTCAGACTTCTGGCATGCTGCTTGGAGGACAATGAAAAGATACTTGTATATGAGTATATGTCGAATGCAAGTCTCAACTTTCACCTGTTTGATGAAAGAAAGAAAAGGCAACTCGATTGGAAACTAAGATTAAGCATTATCAATGGCATAGCAAAAGATTTTGGGTTGGCAAGGTCATTTGAGAAAGGCCAGAACCAAGCAAATACAAGACGAGTAATGGGCACCTTTGGATACATGGCTCCAGAGTACGCTATGGAAGGATTGTTTTCAGTGAAATCTGATGTTTTCAGTTATGGAGTTCTTGTTCTTGAAATCATTTGTGGGAAAAAGAACAGTGGATTCTATCTATCAGAAGAATGTGGTGAAAGCTTGGAAAATTTGGTGTGCAGGAAAATGTTTGGAACTAATGGATCCAGTGCTGGAAGAATCTTGTGTAGAGAGTGA 1596 0.4135 MEGKQFNVRPTYSFLFVFLLGFKPLVTEAQSPNYAGDDCNSTTPKSLSNAYKTNLNNVLSWLSLDAATSKGYNHNSFGNNTPGADAVVYGLYDCRGDVVGYFCQFCVSTASREILQRCLNRVSAIIWYDFCIIRYSNENFFGNVTVDPSWNRVGPKNVSSAEEIRKGEGFMRSLIRKATVETNQLYYMDGFNLSSTQRRYGLVQCSRDLTSDGCRECLEAMLAKVPKCCERNLGWQVSTASCLIKYDDYIFYLFRSPASSVSVPDTHIVFIASGSGKELEEEEVIFSGRSIPDTIRLSSYHNVQTEETLNPDLLTIPLTTILKSTDNFSEASKLGEGGFGPVYKGILQDGRQIAVKRLSQSSGQGSEEFKNEVMLIAKLQHRNLVRLLACCLEDNEKILVYEYMSNASLNFHLFDERKKRQLDWKLRLSIINGIAKDFGLARSFEKGQNQANTRRVMGTFGYMAPEYAMEGLFSVKSDVFSYGVLVLEIICGKKNSGFYLSEECGESLENLVCRKMFGTNGSSAGRILCRE 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00006 531 SUPERFAMILY Protein kinase-like (PK-like) 300 494 IPR011009 -
Spst11g00006 531 Pfam Salt stress response/antifungal 184 249 IPR002902 -
Spst11g00006 531 Pfam Salt stress response/antifungal 39 137 IPR002902 -
Spst11g00006 531 FunFam Cysteine-rich receptor-like protein kinase 10 149 251 - -
Spst11g00006 531 ProSiteProfiles Gnk2-homologous domain profile. 146 251 IPR002902 -
Spst11g00006 531 ProSiteProfiles Protein kinase domain profile. 328 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst11g00006 531 Gene3D Phosphorylase Kinase; domain 1 292 403 - -
Spst11g00006 531 ProSiteProfiles Gnk2-homologous domain profile. 33 140 IPR002902 -
Spst11g00006 531 FunFam Cysteine-rich receptor-like protein kinase 10 294 403 - -
Spst11g00006 531 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 45 436 - -
Spst11g00006 531 Gene3D - 33 140 IPR038408 -
Spst11g00006 531 Gene3D - 154 251 IPR038408 -
Spst11g00006 531 Pfam Protein tyrosine and serine/threonine kinase 331 436 IPR001245 GO:0004672|GO:0006468
Spst11g00006 531 Pfam Protein tyrosine and serine/threonine kinase 437 494 IPR001245 GO:0004672|GO:0006468
Spst11g00006 531 Gene3D Transferase(Phosphotransferase) domain 1 437 521 - -
Spst11g00006 531 FunFam Cysteine-rich receptor-like protein kinase 28 35 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00006 Spst-Chr11 43748 51535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00006 9 506 Receptor kinase-like Gene Family AT4G05200 38.256 5.40e-114 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst11g00006 PK_Tyr_Ser-Thr 1.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00006 - - gmx:100796972 788.875