Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00002 ATGAGAGCATCAACTTCTTCAATTCCCAATCCATCGTCATCGTTGCGTTACTTCTTCTTCTTCTTCCTTCTGTTTGTGCTCCTCGCCCTTCGATCTTCTTCCGGTGACTGCTCCGAATTTCACCACCACGCGCCCATGGCCACTGTCGGAGGCGTGCGCGACTCCCAAGGGTCTCAGAACAGCCTCGAGACTGAATCCCTCGCGCGATTCGCCGTCGACGAACACAACAAGAAGCAGAATTCGCTTCTGGAGTTTGCTAGGGTTGTGAGGGCACAGGAACAGGTTGTTGCTGGTACCCTGCATCACCTTACCCTCGAGGCTATTGAGGGTGGTGAGAGGAAGCTCTATGAAGCCAAGGTGTGGGTAAAACCATGGCTAAACTTCAAAGAACTCCAAGAGTTCAAGCCTGCTGGTGATGCATCACCATTTACCTCTGCTGATCTTGGTGTCAAAAAGGATGGCCACAAATCAGGATGGCAATCTGTTCCAACACATGACCCTCAAGTTCAAGATGCAGCAAATCATGCAATCAGGACAATCCAGCAAAGGTCTAATTCACTAGTTCCCTATGAGCTTCATGAGGTTGCTGATGCAAAGGCTGAGGTCGTTGATGATTTTGCCAAGTTTAATCTGCTTCTCAAGGTGAAGCGTGGAGAGAAGGTAGAGAAGTTCAAAGTAGAGGTACACAAGAATAACCAAGGGGGACTCCATCTAAATCAGATGGAACAAGATCATTCCTAA 741 0.4858 MRASTSSIPNPSSSLRYFFFFFLLFVLLALRSSSGDCSEFHHHAPMATVGGVRDSQGSQNSLETESLARFAVDEHNKKQNSLLEFARVVRAQEQVVAGTLHHLTLEAIEGGERKLYEAKVWVKPWLNFKELQEFKPAGDASPFTSADLGVKKDGHKSGWQSVPTHDPQVQDAANHAIRTIQQRSNSLVPYELHEVADAKAEVVDDFAKFNLLLKVKRGEKVEKFKVEVHKNNQGGLHLNQMEQDHS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00002 246 Gene3D - 46 145 - -
Spst11g00002 246 Pfam Aspartic acid proteinase inhibitor 65 136 IPR000010 GO:0004869
Spst11g00002 246 CDD CY 50 136 IPR000010 GO:0004869
Spst11g00002 246 ProSitePatterns Cysteine proteases inhibitors signature. 93 106 IPR018073 -
Spst11g00002 246 FunFam Cysteine proteinase inhibitor 46 144 - -
Spst11g00002 246 Gene3D - 150 242 - -
Spst11g00002 246 FunFam Cysteine proteinase inhibitor 156 245 - -
Spst11g00002 246 SUPERFAMILY Cystatin/monellin 154 235 IPR046350 -
Spst11g00002 246 SUPERFAMILY Cystatin/monellin 45 139 IPR046350 -
Spst11g00002 246 SMART CY_4 47 137 IPR000010 GO:0004869
Spst11g00002 246 PANTHER CYSTATIN FAMILY MEMBER 38 194 IPR027214 GO:0004869
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00002 Spst-Chr11 11074 14522 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00002 - - gmx:100499887 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00002 11 11074 14522 Spst11g00002 11 11074 14522 ECH