Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01860 ATGGGTGTGGAGAAGGGCGAAGAGATAAAACCTGATGAGGCATGCACGTCAGAGAATCCTGCAGAAACCAGGAGGAAGAAGGAAATGGACGAAGGAAGGGAGAAAGAAAAAGAAAAGACACAGACAGTTCCATTTCATAAGTTGTTTGCTTTTGCAGACTCCACTGACACTCTTTTAATGATTGTTGGGAGCATTGGTTCCATTGGAAATGGTGTGGCTTTACCTCTCATGACATTGCTATTAGGCCAAGTTATTGATAAGTTCCACACTGGTGACCAGAACTCTAACCTACTGGAACAAGTCTCCAAGGTTTGTCTTAAATTTGTATACCTGGCACTGGGAGCTGGGATTGGAGGGATTCTAC 364 0.4396 MGVEKGEEIKPDEACTSENPAETRRKKEMDEGREKEKEKTQTVPFHKLFAFADSTDTLLMIVGSIGSIGNGVALPLMTLLLGQVIDKFHTGDQNSNLLEQVSKVCLKFVYLALGAGIGGIL 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01860 121 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 16 119 IPR039421 -
Spst10g01860 121 SUPERFAMILY ABC transporter transmembrane region 48 118 IPR036640 GO:0005524|GO:0016020
Spst10g01860 121 Gene3D ABC transporter type 1, transmembrane domain 38 121 IPR036640 GO:0005524|GO:0016020
Spst10g01860 121 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01860 Spst-Chr10 18892386 18894567 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01860 34 117 Calmodulin-binding Proteins AT2G36910 34.884 3.51e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01860 K05658 - gmx:100777909 135.191