Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01839 ATGACAATGAAGCTGCTTTTGATAGCCGTTGAACTTGTATGCTTACTGTCTGGGATTTTCTCCTTTGGATCTGAGACACTGTCTGAGCTTTCTTTCTTAGAAAGCGATGTCGTCCCAACTAGGCCTTCCTCCTCCTCTTCATCTCAACCTCAACCTCTCATGGTCGACCTCACTCTCATTCAAGGAGCTGATTCTAAAGGAGCTGTCTGTTTGGATGGCACATTGCCTGGTTACCATTTGGATCGTGGATTTGGATCTGGTGCAGATAGTTGGCTTGTTCATTTAGAGGGGGGAGGATGGTGTAATACCATCAGAAATTGTGTCTATAGAAAAAAAACTCGTCGTGGTTCCTCAAAATACATGGAAAATCAAATACCATTCACGGGAATATTGAGCAACAAACCGGAAGAAAACCCTGATTTCTTTAATTGGAACAGAGTTAAGTTACGGTATTGTGATGGGGCGTCTTTCAGTGGAGATAGTGAAGATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATGGAAGAATTAATGTCAAAAGGAATGCAGAAAGCCAACCAGGCTTTTCTCTCTGGATGCTCTGCGGGTGGCCTGGCATCCATTATACATTGTGATGAGTTCCGGAGCTTGTTTCCAGAATCTTCCAAAGTGAAATGTTTGAGTGATGCAGGTTTTTTTCTTGATGCAACTGATGTATCTGGGGGACGCACACTGAGGAATCTGTTCGGAGGTGTGGTTCAGTTACAGGAGGTACAAAAGAATCTTCCAAAAAGTTGTCTCAGCCAACTAGACCCAACTTCGTGCTTCTTTCCTCAGAATGTGATCGAACATATTGAGACCCCATTGTTTCTACTCAACACAGCTTATGATGTGTGGCAGGTCCAAGCCAGTTTAGCCCCACCTTCTGCTGACCGCCTTGGCTCTTGGAATGAATGCAAATCCAACCATGCAAATTGTAGCTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTGAGTGACATTAAAGACTTCTCAAAGTCATCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGTCAGTCTGAGAGACAGGAGACGTGGTTTGCTGATGACTCTCCCCTTATTGAGGACAAGCCAATTGCAGTTGCTGTTGGAGACTGGTATTTTGATCGAGAAGTTGTCAAAGCCATTGACTGTGCTTACCCGTGTGACAACAGCTGCCATAATCTGGTGTTTAACTTTAAGTGA 1263 0.4339 MTMKLLLIAVELVCLLSGIFSFGSETLSELSFLESDVVPTRPSSSSSSQPQPLMVDLTLIQGADSKGAVCLDGTLPGYHLDRGFGSGADSWLVHLEGGGWCNTIRNCVYRKKTRRGSSKYMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDSEDESAQLQFRGQKIWLAAMEELMSKGMQKANQAFLSGCSAGGLASIIHCDEFRSLFPESSKVKCLSDAGFFLDATDVSGGRTLRNLFGGVVQLQEVQKNLPKSCLSQLDPTSCFFPQNVIEHIETPLFLLNTAYDVWQVQASLAPPSADRLGSWNECKSNHANCSSSQIQFLQDFRNQMLSDIKDFSKSSQTGLFINSCFAHCQSERQETWFADDSPLIEDKPIAVAVGDWYFDREVVKAIDCAYPCDNSCHNLVFNFK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01839 420 PANTHER NOTUM-RELATED 15 414 IPR004963 GO:0016787
Spst10g01839 420 Pfam Pectinacetylesterase 48 398 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01839 Spst-Chr10 18680470 18684801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01839 1 419 Carbohydrate Esterase AT3G62060 64.965 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01839 K19882 - gmx:100786972 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02379 1 32354654 32358898 Spst10g01839 10 18680470 18684801 ECH
Spst10g01839 10 18680470 18684801 Spst1g02379 1 32354654 32358898 ECH
Spst10g01839 10 18680470 18684801 Spst10g01839 10 18680470 18684801 ECH
Spst3g02839 3 77943345 77947828 Spst10g01839 10 18680470 18684801 ECH
Spst1g02398 1 32577849 32583175 Spst10g01839 10 18680470 18684801 PCT