Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01817 ATGGGAAACCTCTTTTGGATTGGCATTGTTGCAGCACTTGTTTTTGGCTTCTGGGTTGATGCCTTTTCAGCCTATCAGTATCACCACTTCAATGAAACCGAGTTCTCTTTGTTGGAGGCTCAAGAACAAGCATATTCGTCCCTCTTTGGGAGGTTTCCTCTCATGGTAGGACTCACACTCATTCAAAGTGCTGCTGCCAAAGGAGCAGTTTGCTTGGATGGAACATTGCCTGGTTATCATTTACATCGGGGATATGGATCAGGAGCAAACAGCTGGATCGTTAATTTAGAGGGAGGTGGGTGGTGTAATGACGTTAGATCATGTGTTTATCGCAAGAAAACACGGCGAGGGTCATCAACATTCATGGAGAAACAGATTCCGTTTACAGGAATATTAAGCAATAGCGCTGAAGATAATCCAGATTTTTTCAACTGGAACAGAGTGAAAATTCGTTATTGTGATGGTGCATCGTTTGCCGGGGATGGTGAACATAAGGCTGCTCAACTGCAATTTAGAGGACAACGTATATGGTTGGCTGCAATTGAAGATTTGATGTCAAAGGGAATGCGATTTGCCAAGCAGGCTCTTCTTTCTGGATGCTCGGCTGGTGGTCTGGCTACTATTATACACTGTGATGAATTTCGAGGTTTTTTCCCACACACTACCAAAGTGAAGTGTCTCAGTGATGCAGGGTTATTTCTTGATGCGATTGACGTGTCTAGGGGACATACCATCAGGAATTTTTTCAGTGGTGTCGTAGGGTTGCAGGGAGTGCAGAAGAATCTGCCGGCCAGTTGTACTAATCACCTCGATCCCACCTTGTGCTTCTTCCCTCAAAACTTGATTGCCGGCGTTAGAACCCCACTATTCATTCTTAATACTGCCTATGACTCATGGCAGATCCAATCAAGCTTAGCTCCTTCATCAGCAGATCCCCGTGGCTATTGGCATGATTGTAGATTAAATCATGCTAAATGTACTGCTTCACAAATCCAATATTTGCAAGGATTCAGGAATCAAATGCTTAATGCTATGAAAGGCTTCTCAAGATCATATCAGAATGGATTGTTCATAAACTCATGTTTTGCTCATTGCCAATCTGAGAGGCAGGATACATGGTTTGCGGACAACTCTCCTGTTGTCGGTAACAAGGCAATTGCTTTGGCTGTTGGAGACTGGTATTTTGACCGAGCAGTTGTTAAGGCCATTGATTGTCCTTACCCCTGTGATAATACATGCCACCATCTTGTCTTCAGATGA 1260 0.4389 MGNLFWIGIVAALVFGFWVDAFSAYQYHHFNETEFSLLEAQEQAYSSLFGRFPLMVGLTLIQSAAAKGAVCLDGTLPGYHLHRGYGSGANSWIVNLEGGGWCNDVRSCVYRKKTRRGSSTFMEKQIPFTGILSNSAEDNPDFFNWNRVKIRYCDGASFAGDGEHKAAQLQFRGQRIWLAAIEDLMSKGMRFAKQALLSGCSAGGLATIIHCDEFRGFFPHTTKVKCLSDAGLFLDAIDVSRGHTIRNFFSGVVGLQGVQKNLPASCTNHLDPTLCFFPQNLIAGVRTPLFILNTAYDSWQIQSSLAPSSADPRGYWHDCRLNHAKCTASQIQYLQGFRNQMLNAMKGFSRSYQNGLFINSCFAHCQSERQDTWFADNSPVVGNKAIALAVGDWYFDRAVVKAIDCPYPCDNTCHHLVFR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01817 419 Pfam Pectinacetylesterase 54 398 IPR004963 GO:0016787
Spst10g01817 419 PANTHER NOTUM-RELATED 54 415 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01817 Spst-Chr10 18513734 18518100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01817 6 419 Carbohydrate Esterase AT1G57590 67.874 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01817 K19882 - gmx:100810716 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02379 1 32354654 32358898 Spst10g01817 10 18513734 18518100 PCT