Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01798 ATGGGCGGAGGCGGAGAGTCCACGGCGCTCGCGGAGGCGCAGTACTCGTCGGCCAAGACGTCGGTGTGGTGGGACATAGAGAACTGCCACGTCCCCAAAGGGTGCGATCCCCACGCCATTGCCCAGAACATAAGCTCTGCCCTTGTTCGTATGAACTACTGTGGCCCCGTTTCCATCTCCGCCTACGGAGACACCACTCGCATCACTGCTTCCGTCCAGCACGCCCTTTCCAGCACCGGCATCTCCCTCAACCATGTCCCCGCCGGTGTTAAAGATGCAAGCGACAAAAAGATTATTGTTCACATGCTGTTCTGGGCCGTGGATAATCCTGCACCTGCTAATTACTTATTAATTTCTGGTGATCGAGACTTCTCCAATCCTCTTCACCAGTTGCGACTGAGGAGGTATAATATTCTTCTCGCACAACCACAGAAAGCTTCTGCACCCCTTGTAGCAGCTGCTAAGAGTGTGTGGCTTTGGACTAGTCTCTTGGCTGGAGGACCTCCCCTCATGAATGACGAATCACATCAACTTAGTAATAATAGCATCCAATTGTCTTTTGACACATTGCCGGTTCCAGTCCCTAACGCAGTTCAAATACCACATTACGTGGAATCCTTTTCAGAAGTTCATACCGGAACTCAGAAATTTCCAAGTACAGGAAGGCAACTTGATTCTAGACATCATGGGAAAATGAATGGGAGAAATTCCAGTAAACCAAATGGACCTAAGGTCGTGAATCCAGCTCCAGTTGGACTTCAAGAAAATTATGGCAATATAAATTCTTCTCGACCTGGCAACTATACCCATAATGTTCCCCCAAGTAATTCTACACCAAATTTTACTCGTGGCAATCCTGACCAAATGCGGGGCAATAATGGTAATCTACAAGGCAATCTTCAAACTCCATATTCACAGCCATTAAGATCAAACCCTTTTCCTTTGCAGCCTCCTTTTGCATCAAGCAATTCATTTTCTCCAAATTCCCAAACTTTAGCAACTTCAGTGGTGCCACCTAGGACTGGTGGGCCCAGCTTCTCTGCAGCACCACTTACAAATGTGCCAGATATTGGCAATCTGAAAATTTCTGGACATCTAAGTAATGCTCACGTTCCACGCCCTGTTAAACAACGGAACGGGGACTTGAATCAGGGTTCCAACTGTAATTCTCCAAATTCTGTTAAGTCAATTGATGAACAAAATGGACATATGATACTGTACACACAACAACTGTATAACGGCTTTTCACATGGTCCAGAATACCAACCTACATCATCGGCAACTGTGGGTGATAATATCCTTTCTGGTAATGGTAAGCGGGGATCTCCAGGATTTCCTAAACCTTCTGAATACGTCCAAGGTCTTATAGGGGTAGTTTTACTTGCCCTGAACACACTAAAAACTGAAAAAATTATGCCAACTGAGTCAAATATAACAGATTGTATTCGATGTGGAGATCCCAAGCATCGCAACACAGATGTCAAGAAGGCTCTGGAGAGTGCTATTGAGCAGCAGATGGTAGTGAAGCAGAATGTAGGTGCTTTGCAGTTGTTTGTTGGTAAGAATGATAAGGTTTGGCAGTGTGTAAACCCTATGGGTCGTAATCCTAAGAAGTACACAAAAGAGACATGGAATGAAATTAAAAAATTTCTAACTACTCCTTCTGGAAGATTAGCAATAATGGGTACTCAGTGCAAGTAA 1701 0.4503 MGGGGESTALAEAQYSSAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRMNYCGPVSISAYGDTTRITASVQHALSSTGISLNHVPAGVKDASDKKIIVHMLFWAVDNPAPANYLLISGDRDFSNPLHQLRLRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLMNDESHQLSNNSIQLSFDTLPVPVPNAVQIPHYVESFSEVHTGTQKFPSTGRQLDSRHHGKMNGRNSSKPNGPKVVNPAPVGLQENYGNINSSRPGNYTHNVPPSNSTPNFTRGNPDQMRGNNGNLQGNLQTPYSQPLRSNPFPLQPPFASSNSFSPNSQTLATSVVPPRTGGPSFSAAPLTNVPDIGNLKISGHLSNAHVPRPVKQRNGDLNQGSNCNSPNSVKSIDEQNGHMILYTQQLYNGFSHGPEYQPTSSATVGDNILSGNGKRGSPGFPKPSEYVQGLIGVVLLALNTLKTEKIMPTESNITDCIRCGDPKHRNTDVKKALESAIEQQMVVKQNVGALQLFVGKNDKVWQCVNPMGRNPKKYTKETWNEIKKFLTTPSGRLAIMGTQCK 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01798 566 PANTHER LIMKAIN B LKAP 15 508 IPR024768 GO:0005777|GO:0010468
Spst10g01798 566 MobiDBLite consensus disorder prediction 212 311 - -
Spst10g01798 566 MobiDBLite consensus disorder prediction 254 311 - -
Spst10g01798 566 Pfam NYN domain 19 155 IPR021139 GO:0004540
Spst10g01798 566 Gene3D - 11 162 - -
Spst10g01798 566 MobiDBLite consensus disorder prediction 370 389 - -
Spst10g01798 566 CDD PIN_limkain_b1_N_like 19 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01798 Spst-Chr10 18360700 18363491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01798 11 181 C2H2 Transcription Factor Family AT5G61190 74.269 7.41e-82 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01798 - - gmx:100794384 931.398