Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01794 ATGGGTGCTGATCTTAAAGCAGAATTGTCCGTGAAAACTCCTGTTTTTGATCTTAAGGTTTGGGAAGTAATTGGAATTGCAGTTGGATTGTTTATTATTGTCATCCTCTGTGTGCTCTCATTTTGGCTTACTTCAAGGAAGAAATCTAGAAAAGCCAGGGACAGGGTTCCTGTTAATCACATACCTACTATCTCAAAGGAAATCACGGAAGTGCGGGTTGAGCAAGTGCCGGCGAACGGATTTGTTCCTCGTGAAGGAATACTTCTTACAATTCATGATAAATCCAGTGACAAGGAATCAGACAAAGTTATGCTTCATTTAGGTGTTGGGAAGAAGAAACACGGGGATAGTGGCAGTCACTCGGATTCATTTCATTACTTGGAGAAAGATGGTGGAGGGTCACAATCAGGGGAGGAAATAAGCTCTGGCTCGGTTGGAATGTACATGCCCTCTTCTTCATACCCTGTAACAGCTCCTTCACCTCTCTCTGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGCCACTGGTTTACTCTGAGGGATCTTGAACTTGCCACAAACCGTTTTTCGAAAGAAAATGTAATTGGTGAGGGTGGGTATGGAGTTGTTTACCGGGGACAGTTGATAAATGGGACTCCAGTGGCAGTTAAAAAGATACTCAATAACATTGGTCAAGCTGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTCCGACATAAAAATTTGGTTCGACTTTTGGGGTACTGCATGGAGGGGACTCACAGGATGTTAGTCTATGAATACGTCAGTAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGGCATCATGGATATCTTACCTGGGAAGCACGCATCAAGATTGTTCTTGGCACGGCTAAGGGGCTTGCATATTTGCATGAAGCAATTGAGCCAAAGGTGGTACACCGAGATATCAAGTCAAGCAACATATTAATTGATGATGACTTTAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTACTGGGTTCTGGGAAGAGTCATGTTGCAACACGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGTCTTCTAAATGAAAAAAGTGATGTTTATAGCTTTGGTGTTGTGCTATTGGAAGCAATTACTGGAAGAGATCCAGTGGACTATGGTCGCCCCGCACAGGAAGTTAATATGGTTGATTGGCTTAAGATGATGGTTGGAAACAGGCGATCAGAAGAAGTGGTGGACCCAAACATTGAGGTGAAGCCATCTACAAGGGCTTTGAAACGGGCGCTCTTAACTGCTTTGAGATGTGTAGATCCAGATTCAGAGAAAAGACCCAAGATGGGTCAAGTTGTGCGTATGCTCGAGTCAGAGGAGTACCCTTTAGCTAGAGAGGACCGTAGGCATCGAAGAAATCAGGGGGTTAACTCAGACATTGAATCCCATAAAGATAGTTCTGACACGGATGGGAGTGAGATCCAGGGTTCTAGATCAGCAAGTGGAAGATTCTTGGATTTGCCTACCCAAGATGGGCATGGCAGAGGCTGA 1563 0.4434 MGADLKAELSVKTPVFDLKVWEVIGIAVGLFIIVILCVLSFWLTSRKKSRKARDRVPVNHIPTISKEITEVRVEQVPANGFVPREGILLTIHDKSSDKESDKVMLHLGVGKKKHGDSGSHSDSFHYLEKDGGGSQSGEEISSGSVGMYMPSSSYPVTAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVIGEGGYGVVYRGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCMEGTHRMLVYEYVSNGNLEQWLHGAMRHHGYLTWEARIKIVLGTAKGLAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGSGKSHVATRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPAQEVNMVDWLKMMVGNRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESEEYPLAREDRRHRRNQGVNSDIESHKDSSDTDGSEIQGSRSASGRFLDLPTQDGHGRG 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01794 520 MobiDBLite consensus disorder prediction 467 520 - -
Spst10g01794 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Spst10g01794 520 MobiDBLite consensus disorder prediction 112 127 - -
Spst10g01794 520 MobiDBLite consensus disorder prediction 467 495 - -
Spst10g01794 520 PANTHER OS01G0323000 PROTEIN 5 485 - -
Spst10g01794 520 SMART serkin_6 189 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01794 520 SUPERFAMILY Protein kinase-like (PK-like) 173 468 IPR011009 -
Spst10g01794 520 ProSiteProfiles Protein kinase domain profile. 189 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01794 520 FunFam Putative receptor-like serine/threonine-protein kinase 265 476 - -
Spst10g01794 520 Gene3D Phosphorylase Kinase; domain 1 171 264 - -
Spst10g01794 520 FunFam Putative receptor-like protein kinase 171 264 - -
Spst10g01794 520 MobiDBLite consensus disorder prediction 112 144 - -
Spst10g01794 520 CDD STKc_IRAK 195 461 - -
Spst10g01794 520 Gene3D Transferase(Phosphotransferase) domain 1 265 478 - -
Spst10g01794 520 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
Spst10g01794 520 Pfam Protein kinase domain 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01794 Spst-Chr10 18295497 18299467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01794 132 463 Trihelix Transcription Factor Family AT1G70460 47.929 7.20e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Spst10g01794 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01794 - - gmx:100778269 915.99