Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01791 ATGGAAGTTAAAAGAGAAAGGGATTCTGTGAAGATGACATCGGTTGGTGTGGCGCCAACTTCAGGTTTGAGAGAGGCCAGTGGGCATGGAGCAGCAGGTGTTGATAGATTGCCAGAGGAGATGAACGATATGAAAATTAGGGATGATAGAGAAATGGAAGCCACAGTTGTTGATGGCAATGGAACGGAGACAGGACATATCATCGTGACTACCATTGGGGGTAGAAATGGTCAGCCGAAGCAGACTATAAGCTACATGGCAGAACGAGTTGTAGGTCATGGATCATTTGGAGTTGTCTTCCAGGCTAAGTGTTTGGAAACTGGTGAAACTGTGGCTATCAAAAAGGTTCTTCAAGACAAAAGGTACAAGAACCGGGAGCTGCAAACAATGCGCCTTCTTGACCATCCAAACGTTGTTTCTTTGAAGCATTGTTTCTTTTCAACCACTGAAAAGGATGAATTATACCTTAATTTGGTACTCGAGTATGTTCCTGAAACAGTAAATCGTGTGATCAAACATTACAACAAGTTGAACCAAAGGATGCCTCTGATTTATGTGAAACTCTACACATACCAGATCTTTAGAGCATTATCTTATATTCATCGTTGTATTGGAGTCTGCCATCGGGATATCAAGCCACAAAATCTATTGGTCAATCCACACACACACCAGGTTAAATTATGTGACTTTGGAAGTGCAAAGGTTTTGGTAAAAGGCGAACCAAATATATCGTACATATGTTCTAGATATTATAGAGCACCTGAGCTCATATTTGGAGCAACTGAATATACTACAGCCATTGACATCTGGTCTGTTGGATGTGTTTTAGCTGAGCTGCTTCTTGGACAGCCTTTGTTCCCTGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATAAAGGTTCTTGGCACCCCAACAAGGGAAGAGATTAAATGCATGAACCCTAACTATACAGAATTTAAATTCCCACAGATTAAAGCACATCCATGGCACAAGATCTTCCATAAGCGCATGCCTCCAGAGGCTGTTGATCTGGTATCAAGACTACTACAATACTCCCCTAACTTGCGGTGCACAGCTTTAGATGCCTTGATGCATCCTTTCTTTGATGAGCTTCGTGATCCAAATACTCGCTTGCCAAATGGCCGATTCCTTCCACCACTATTTAATTTCAAATCTCATGAACTGAAAGGAGTCCCAGCTGAGATTTTGGTGAAATTGGTTCCAGAGCATGCGAGGAAGCAATGCCCGTTTCTTGGCTTGTGA 1266 0.425 MEVKRERDSVKMTSVGVAPTSGLREASGHGAAGVDRLPEEMNDMKIRDDREMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVNRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALDALMHPFFDELRDPNTRLPNGRFLPPLFNFKSHELKGVPAEILVKLVPEHARKQCPFLGL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01791 421 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 49 415 - -
Spst10g01791 421 CDD STKc_GSK3 80 372 IPR039192 -
Spst10g01791 421 Gene3D Phosphorylase Kinase; domain 1 69 164 - -
Spst10g01791 421 ProSiteProfiles Protein kinase domain profile. 85 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01791 421 FunFam Shaggy-related protein kinase kappa 165 413 - -
Spst10g01791 421 ProSitePatterns Protein kinases ATP-binding region signature. 91 115 IPR017441 GO:0005524
Spst10g01791 421 SMART serkin_6 85 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01791 421 MobiDBLite consensus disorder prediction 1 39 - -
Spst10g01791 421 SUPERFAMILY Protein kinase-like (PK-like) 84 395 IPR011009 -
Spst10g01791 421 FunFam Glycogen synthase kinase-3 beta 69 164 - -
Spst10g01791 421 Pfam Protein kinase domain 85 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01791 421 Gene3D Transferase(Phosphotransferase) domain 1 165 413 - -
Spst10g01791 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01791 Spst-Chr10 18268801 18272570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01791 91 397 MAP Kinase Gene Family AT2G43790 34.796 1.20e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Spst10g01791 Pkinase 8.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01791 K27413 - gmx:100798867 840.876