Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01787 ATGGCTGATAGTCTCATGCCACTCTTGGCCATGATTGCTGTTCAGTTGGCTTATGCAGGGATGAATATTTCCTCAAAGCTTGCAATACAATCTGGCATGCACCCTCTGGTCCTTGTTGCTTATCGTCAAATTTTTGCTACTCTCTCCTTAGCTCCTTTTGCTTATTGGTTTGAACGGAAGACGGCTCCCCGAATGACAAAGCGCATTGCTTTCCAGATATTATTATCTTCCTTAACAGGAGTAACAGGAAATCAGATACTATACTTCGTGGGGCTTAAATATTCAACCGCTACAATTGCATGTGCACTAAGCAACTTGCTCCCAGCATTCACTTTTGTTCTTGCACTCCTCTTCGGACAAGAATGGTTGATGATCAAGACCATAGCCGGGGTAGCGAAGGCGTTAGGGACAATACTTAGTGTGGGTGGAGCAGTGCTTCTATCATTTTATCATGGAAAAGTCCTTGGTCTAGGTGAGTCAAAAATTCACTGGAAATTTGCTGAAAGAATGGAAAGGCAAGCCTCTTCTGGTGGCCAAACAAACTCGCTTCTGGGTCCTGTTGCTGTAATTGGTAGTGCTCTTGTTTGGGCAGTATGGTTCATAATTCAAGCAAACATGAGCAAGAGCTATGCAGTTCCTTATACCAGCACTTTCTACATGTGTTTGATGGCAAGCATTCAGTGCTTGGCCATTGCCTTGTCTGTTGAACACGATGCCTCAGCTTGGTCACTGCATAGTCCCTTAAGACTTACCTCTGCACTTTATGCGGGAATTATTTGTACTGGGCTAGTGTATGTGCTCATATCGTGGTCCATCGAGAAGAAAGGTCCTCTCTATGTGTCTGTGTTCTCCCCTTTGCTGCTTGTCATCACTGCTGTTGTTAGCTGGGCCCTGCTGCACGAGCAATTATACGTTGGCACTGCCATAGGGTCTCTGCTGATAGTGTTGGGGCTGTACTTTGTGTTGTGGGGAAAGAACAGAGAGGTGTGTAAGAATGTCGCTGTTCATAAGATAACTGAGGCAATGAAGGATGAAGTTAAAGATATGGAATTGCAACCCTATGATCCTTCCAATGCTAAAGTTAAAGGTAACGGAAACCACCATGCTGATGATTGA 1116 0.4462 MADSLMPLLAMIAVQLAYAGMNISSKLAIQSGMHPLVLVAYRQIFATLSLAPFAYWFERKTAPRMTKRIAFQILLSSLTGVTGNQILYFVGLKYSTATIACALSNLLPAFTFVLALLFGQEWLMIKTIAGVAKALGTILSVGGAVLLSFYHGKVLGLGESKIHWKFAERMERQASSGGQTNSLLGPVAVIGSALVWAVWFIIQANMSKSYAVPYTSTFYMCLMASIQCLAIALSVEHDASAWSLHSPLRLTSALYAGIICTGLVYVLISWSIEKKGPLYVSVFSPLLLVITAVVSWALLHEQLYVGTAIGSLLIVLGLYFVLWGKNREVCKNVAVHKITEAMKDEVKDMELQPYDPSNAKVKGNGNHHADD 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01787 371 Pfam EamA-like transporter family 7 139 IPR000620 GO:0016020
Spst10g01787 371 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Spst10g01787 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 327 - -
Spst10g01787 371 MobiDBLite consensus disorder prediction 352 371 - -
Spst10g01787 371 PANTHER WAT1-RELATED PROTEIN 6 329 IPR030184 GO:0016020|GO:0022857
Spst10g01787 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01787 Spst-Chr10 18243864 18246367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01787 1 366 Nodulin-like Gene Family AT1G09380 55.041 3.00e-142 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01787 - - gmx:100802059 583.563