Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01785 ATGGCCGGTAATGGAACCCACTCAGATTCAAAAGCTGCAACAATTGTGATTAAAGATCTCAGATTTACATACCCCGGCATCGACGGCCACCCGCCGCCGGGTTCCTCTCCGCTCATTCAAAGTTTCTCTCTCACTCTCCATTCCGGCGACCGCTGCCTTCTCGTTGGTTCCAACGGCGCCGGGAAAACCACGATCCTGAAGATACTAGGAGGGAAGCACTTGGTGGAGCCTGACATGGTTCGCGTGCTTGGAAGATCAGCTTTTCACGATACCACTTTGGTGTCTTCTGGTGATCTCTGTTATCTTGGTGGCGAGTGGAGGCGAGATGTTGCTTTTGCGGGTTTTGAGGTGCCAATACAGATGGACATTTCTGCTGAAAAAATGATATTTGGTGTGGCTGGGATTGATCCTCAGAGAAGAGCGGAGCTCATCAAGGTATTGGATATTGATCTTTCATGGAGATTACATAAAGTATCTGATGGTCAAAGAAGAAGAGTACAGATTTGTATGGGTCTCCTCAAACCATTCAAGGTTCTTCTTCTAGATGAGATAACAGTTGACCTTGATGTTCTAGCAAGAGCTGACCTTCTGAGATTTCTAAGAAAGGAATGTGAAGAGAGGGGTGCCACCATTATCTATGCAACACATATATTTGATGGTCTCGAGGATTGGCCTACACATATTGTTTATGTCGCCCATGGAAAGCTACAACTAGCAATGCCTATGGACAAAGTCAAAGAAATCAGCAAATTGTCGCTAATGAGAACAGTAGAAAGTTGGCTGCGGAAAGAACGAGATGAAGATAGAAAGAAAAGGAAAGAGAGGAAAGCAGCTGGTCTTCCTGAATTTGGAGCGCAAGTTGAGGGAAGCCGTGTAACAGGGGATCCTGCCCGTGCTGCAGTTCGAGCAATTAATAATGGCTGGGCAGCAGGACGATTAAATTCCACCGTTGCAGGTGAAGAAAACTTGATCCTCAGCTCGAATCGAGTATTGAGGCAGTAG 1002 0.4641 MAGNGTHSDSKAATIVIKDLRFTYPGIDGHPPPGSSPLIQSFSLTLHSGDRCLLVGSNGAGKTTILKILGGKHLVEPDMVRVLGRSAFHDTTLVSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVAGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLEDWPTHIVYVAHGKLQLAMPMDKVKEISKLSLMRTVESWLRKERDEDRKKRKERKAAGLPEFGAQVEGSRVTGDPARAAVRAINNGWAAGRLNSTVAGEENLILSSNRVLRQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01785 333 Gene3D - 10 281 IPR027417 -
Spst10g01785 333 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 13 261 - -
Spst10g01785 333 SMART AAA_5 48 235 IPR003593 GO:0016887
Spst10g01785 333 Pfam ABC transporter 40 185 IPR003439 GO:0005524
Spst10g01785 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 250 IPR027417 -
Spst10g01785 333 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 258 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01785 Spst-Chr10 18229403 18232745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01785 17 212 Calmodulin-binding Proteins AT2G36910 23.005 3.52e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01785 K12608 - gmx:100782386 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01785 10 18229403 18232745 Spst10g01785 10 18229403 18232745 ECH