Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01777 ATGTCTGAAGACAACGACAGAGAGCAGTACGGAGTGCTCCTTTACTACAACTACGCTGAAATTCCAGACCTCAATCACCTCCTCACCTTCTACCACTCCAACTGCTCCTCCCTCAACATACGAGGTCGTGTTCGCCTTTCTTCCCATGGCGTCAATGTCACCGTTAGTAATCATACATTCTATTCTTCCCTTTCTTTCTTCATTTTCTGCCACTACTCATTTCTCTTCGCACAGGTTGGCGGCAATTTATCCTCTCTCCAGTCTCACATTGAAGCCCTCAAAGCCTACGAATCCTTGTTTCGTCACACCGATTTCAAGCTTGCCACGTGTCATCGCCCACTAAATGACCAAGTTGCCCAGGAGTGTGGTTTCACTTCTCTTTCTATTCGGATCGTCGATGAACTTGTTACTCTCAGTTCTCATCCACTGTTAAAATCGCCCGATATCTCCAATGCTGGAAAGCATCTCTCTGCACTTGACTTCCATTCTTCCCTTCACAATGCCAACAACGAGAGTCCAGAAAACGGCCTTGTTTTACTTGATGCTAGGAATTTGTATGAAACAAGAATTGGGAAGTTTCATGTGCCAAATGTTGAGACTTTGGATCCACAAGTTAGGCAGTATAGCGATTTGTCCTCGTGGATAGATGATAATGATTATGAAGCTTCGACGGATACCACGGTCACTGGGACATGGCTGATGTCCCTAATGTATTGTACTGGTGGAATCCGGTGTGAGATGGCATCAGCATATATTAAGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGGGGCATACAACGGTATTTGGAGCAATTCCCTGATGGTGGTTTTTTCAAAGGAAAGAATTTTGTATTTGACCACCGAAACTATACAGATCATCATGGTGTTATTGCGTTCACTATTCACGTGATATCAGTTGGAAGTTCAGATGATAATGTTATTGGTACCTGCCTTGTATGTCAATGTTCGTTTGATGATTACTCTTCTCGTTGCCGGTGTACTTACTGCAGAATGCTTGTTTTGGTTTGCCGTAGTTGTCAGAATGAATCTACTGCGTATGTTTGTGAGCTATGTCAGAAACAGGGCAAGGCCGTCATGTCAACACAGTTAATTGAAAGTGGTGAATCAAAAACATCATTGGCAGATGCCGAGTTCCAGAATTTTTCTTCCGATACTATATGTTTGCCTCGAGTGCCTAAGGGAGATGATCCAAGGACCTCAAGAAAACTCAGAATCTTGTGCTTGCATGGCTTTCGGCAGAATGCATCCAGTTTCAAAGGTAGAACAGCATCACTAGCCAAGAAACTGAAGAAAATGGCTGAATTTGTTTTTATTGATGCTCCCCATGAATTGCCATTCATCTACCAAAACCCCATGTCTGAGCCCAATGTAAATTGTGCATCGTCGTCATTGCTATCTAGTCCTCCACCGCCATTGGAGAATTGCAAGAAGAAGTTTGCATGGTTTGTGGCACCCAACTTCGATGGAAGTAGTGGGGTTGACTGGAAGGTAGCAGATGGTCCATTTGATCCCCTTCAATACCAGCAGCAAACTGATGGATATGATATTTCACTATCACACTTGAAGAGTGTGTTTTCCCAGGAAGGACCATTTGATGGAATATTGGGATTTTCACAGGGAGCAGCAATGGCTGCTTTAATCTCTGCACTACAAGAAAAGCTGAAAGGTGAAATGGACTTCAAATTTGTAGTCTTGTGCTCGGGCTTTGCTCTCCGGATGAAAGCGATGGAGTGTAACCCTATCAAGTGCCCTTCTCTTCATATTTTTGGTAATGAACATGGTAAAGACAGACAGATAGCTAACCAAACAAGCAAGGAACTTGCTTCTCTATATGATAGTGATTGTTCTACGATCGTTGAGCATGATAGTGGTCATATAATTCCTACTCGGTCCCCTTACATTGATGAGATCAAGGGTTTCCTTAATCGCTTTCTGTAG 1971 0.4318 MSEDNDREQYGVLLYYNYAEIPDLNHLLTFYHSNCSSLNIRGRVRLSSHGVNVTVSNHTFYSSLSFFIFCHYSFLFAQVGGNLSSLQSHIEALKAYESLFRHTDFKLATCHRPLNDQVAQECGFTSLSIRIVDELVTLSSHPLLKSPDISNAGKHLSALDFHSSLHNANNESPENGLVLLDARNLYETRIGKFHVPNVETLDPQVRQYSDLSSWIDDNDYEASTDTTVTGTWLMSLMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRNYTDHHGVIAFTIHVISVGSSDDNVIGTCLVCQCSFDDYSSRCRCTYCRMLVLVCRSCQNESTAYVCELCQKQGKAVMSTQLIESGESKTSLADAEFQNFSSDTICLPRVPKGDDPRTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKMAEFVFIDAPHELPFIYQNPMSEPNVNCASSSLLSSPPPPLENCKKKFAWFVAPNFDGSSGVDWKVADGPFDPLQYQQQTDGYDISLSHLKSVFSQEGPFDGILGFSQGAAMAALISALQEKLKGEMDFKFVVLCSGFALRMKAMECNPIKCPSLHIFGNEHGKDRQIANQTSKELASLYDSDCSTIVEHDSGHIIPTRSPYIDEIKGFLNRFL 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01777 656 ProSiteProfiles Rhodanese domain profile. 173 281 IPR001763 -
Spst10g01777 656 Gene3D alpha/beta hydrolase 410 656 IPR029058 -
Spst10g01777 656 Pfam Serine hydrolase (FSH1) 412 647 IPR005645 -
Spst10g01777 656 FunFam esterase OVCA2 isoform X6 410 656 - -
Spst10g01777 656 SUPERFAMILY alpha/beta-Hydrolases 413 656 IPR029058 -
Spst10g01777 656 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 149 293 IPR036873 -
Spst10g01777 656 Gene3D - 145 304 IPR036873 -
Spst10g01777 656 Pfam Rhodanase C-terminal 283 363 IPR022111 -
Spst10g01777 656 Pfam UPF0176 acylphosphatase like domain 11 134 IPR040503 -
Spst10g01777 656 Gene3D - 1 64 - -
Spst10g01777 656 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 655 IPR020936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01777 Spst-Chr10 18175987 18188297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01777 6 656 Sulfurtransferasese or Rhodanese AT1G09280 58.321 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01777 - - gmx:100786152 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01777 10 18175987 18188297 Spst10g01777 10 18175987 18188297 ECH