Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01771 ATGCACGCAGTTTGTAGAGCAGTGGATTGTGGTGGCTCCAAAATTTCAAGCACCATTGTTGTTGATCAATCAAACAAAGCAAATTTCAGAACAATCCAAGCTGCCATTGATTCAATAAAACCAAACAATGCTCAGTGGGTGAAAATTCAGATAAATGCTGGCGTATACAAAGAGAAGGTTCAAATTCCAACTGAAAAGCCATGCATCTTTTTGCAAGGCCAAGGAAAACAAGTCACCACCATTACAAACAATGACCACAATGCACCAAATACCAGTTCCACATTCACTGCTTTTGCAAACAACTTAGCTGCATCAGAAATCACTTTTAAGAACTCATACGGTATCATACAACGCTTGAACATGCATAGGAATGAGAGACATTTTGGGATAAGGGACCCATCATTGGCCGCAAGAATATCTGGAGATAAATGTGCCTTTTACAATTGTAATTTCATTGGGTTTCAAGATACTGTTTGGGATGAAAGAGGTCGTCACTACTTTCAAAACTGTCTCTTTGAAGGTGCAGTAGACTTTATATTTGGCGCTGGGCAATCCTTTTACCAGGATTGTGTGTTAAATGCCACTGCCTTGGGTTCCATAACAGCACAAGGACGCGCTTCAACGAGTGACCAAAGTGGTTTTGTGTTTGAAGGAGGTTCTGTGGTTGGCAGTGGTGTTGGGAACTCCTTATTGGGTAGAGCCTATCGATCGTGTTCGAGAGTCATATTTCATAAAACAGCCTTGGCTCCTGTGGTTGAACCTGTAGGATGGGATGCTTGGAATTATACAAACAAAATTTCTGAAGATTGTAAACAAATTTATGCAGAGAGTGCATTTTCTTCTCTGAGGTTGAGTGTACAGGACCAGGTGCGAACACTTCGGAACGTGTTACTTGGGCGAAGAAATTGA 909 0.4136 MHAVCRAVDCGGSKISSTIVVDQSNKANFRTIQAAIDSIKPNNAQWVKIQINAGVYKEKVQIPTEKPCIFLQGQGKQVTTITNNDHNAPNTSSTFTAFANNLAASEITFKNSYGIIQRLNMHRNERHFGIRDPSLAARISGDKCAFYNCNFIGFQDTVWDERGRHYFQNCLFEGAVDFIFGAGQSFYQDCVLNATALGSITAQGRASTSDQSGFVFEGGSVVGSGVGNSLLGRAYRSCSRVIFHKTALAPVVEPVGWDAWNYTNKISEDCKQIYAESAFSSLRLSVQDQVRTLRNVLLGRRN 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01771 302 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 16 288 - -
Spst10g01771 302 Gene3D - 12 294 IPR012334 -
Spst10g01771 302 SUPERFAMILY Pectin lyase-like 15 267 IPR011050 -
Spst10g01771 302 Pfam Pectinesterase 19 266 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01771 Spst-Chr10 18110255 18114973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01771 9 261 Carbohydrate Esterase AT2G19150 42.529 1.40e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01771 - - vun:114192590 351.673