Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01766 ATGGATTTCCAGGGATTCCTTAACGATTTGCAGGATTGGGAACTTTCTAGAAAGGATAAATCACAAACAATGAAGTCACAAAAGGAAAATCAATTTGCAAAAGCTTCGTCTTCTCGACTTACTGGATCCATGGGTATGGAGAAGGCATCAAAAGCAGATACTAATTCTTTTGATCGTGCGAGAAATTCTCCAGGATTGTATGATTTATCAAAATTTAATGATCCTTTCAATCGTTTACAAAATAGTTTTGTTCCTGAAGACGTTCCTGATGCTGCTTCCGAGAAAGACCTGGGGAATGAGTTTTTCAAGCAGAAGAAATTTAAGGAAGCTACAGACTGCTATTCAAGGAGCATTGCCTTATCACCAACAGCTGTAGCATATGCAAATAGAGCAATGGCCAATATCAAGCTCAGAAGATTCCAAGAAGCTGAGGATGACTGCACAGAGGCCTTAAATCTTGATGATCGTTACATAAAAGCATACTCACGAAGAGCAACAGCTAGAAAAGAACTTGGAAAAATTAAAGAATCAATGGAGGATGCTGAATTTGCCTTGAGGTTGGAACCAAACAATCAAGAAATAAAAAAACAGTATGCTGATGCTAAATCTTTGTATGAGAAAAAAGCATCAGGAGCTCTGAGAAGCACTGTACATGGAACTCAAAAAGTGGGAAAGTCAGAGGAAAAAGTAAACGGAGGCATCTACCCCATTTCACATGGTACTCAAAAGTCCATGCCATCTGAAGTTAATCATAGAAAGGTTGCTGAGCAGCAAATACCTGTCAAAGAATCACTTGTAACAGAGGAGGTTGATAGCAGAGATACAATAACCAGAAGCAGGCCTCAAGCACAAGAAGGTGATGGTTCTAAGAAAGGTTTGAGTGCAAGCAACAGTTTGGAGCAGAGAAATCACAGAATTAATAAGCAGGAAATGAAAGCATCTGTTCAACAGCTTGCTTCTCGAGCTGCTTCTAGAGCCATGGCTGAAGCTGCCAAAAACATAACACCACCAACCACTGCATATCAGTTTGAGGTCTCCTGGAGAGCATTTTCAGGTGATCTTGCTCTGCAGGCTCGTCTATTAAAGGCAATATCTCCCCATGAATTACCAAAAATATTCAAAAATGCCTTATCTTCTACCCTACTGGTTGACATCATCAAGTGTCTTTCATCTTTTTTCACTGAGGACATGGATCTAGTTATCAGTTATATGGAGCATTTGATCAAAGTACCAAGATTTGACATGATTGTTTTGTGCCTTTCATCAAAAAATAAGGATGACATACGCAAGATCTGGGATGATGTCTTCAGAAGTGAGGCAACACCAATTGAGTATGCAGAGATTCTGGACAACCTCAGATCACAGTTCTGCCTTGGACAATGA 1383 0.3977 MDFQGFLNDLQDWELSRKDKSQTMKSQKENQFAKASSSRLTGSMGMEKASKADTNSFDRARNSPGLYDLSKFNDPFNRLQNSFVPEDVPDAASEKDLGNEFFKQKKFKEATDCYSRSIALSPTAVAYANRAMANIKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKIKESMEDAEFALRLEPNNQEIKKQYADAKSLYEKKASGALRSTVHGTQKVGKSEEKVNGGIYPISHGTQKSMPSEVNHRKVAEQQIPVKESLVTEEVDSRDTITRSRPQAQEGDGSKKGLSASNSLEQRNHRINKQEMKASVQQLASRAASRAMAEAAKNITPPTTAYQFEVSWRAFSGDLALQARLLKAISPHELPKIFKNALSSTLLVDIIKCLSSFFTEDMDLVISYMEHLIKVPRFDMIVLCLSSKNKDDIRKIWDDVFRSEATPIEYAEILDNLRSQFCLGQ 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01766 460 ProSiteProfiles TPR repeat profile. 91 124 IPR019734 GO:0005515
Spst10g01766 460 SUPERFAMILY TPR-like 89 206 IPR011990 GO:0005515
Spst10g01766 460 MobiDBLite consensus disorder prediction 281 299 - -
Spst10g01766 460 Pfam Tetratricopeptide repeat 126 154 IPR019734 GO:0005515
Spst10g01766 460 Pfam Potential Monad-binding region of RPAP3 336 425 IPR025986 -
Spst10g01766 460 MobiDBLite consensus disorder prediction 266 280 - -
Spst10g01766 460 PANTHER OS05G0129900 PROTEIN 1 459 - -
Spst10g01766 460 SMART tpr_5 91 124 IPR019734 GO:0005515
Spst10g01766 460 SMART tpr_5 158 191 IPR019734 GO:0005515
Spst10g01766 460 SMART tpr_5 125 157 IPR019734 GO:0005515
Spst10g01766 460 ProSiteProfiles TPR repeat profile. 158 191 IPR019734 GO:0005515
Spst10g01766 460 MobiDBLite consensus disorder prediction 216 299 - -
Spst10g01766 460 MobiDBLite consensus disorder prediction 17 59 - -
Spst10g01766 460 MobiDBLite consensus disorder prediction 26 59 - -
Spst10g01766 460 Gene3D Tetratricopeptide repeat domain 80 189 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01766 95 161 U-box Gene Family AT3G07370 39.706 6.17e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01766 K23002 - gmx:100784528 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01766 10 18062746 18067939 Spst10g01766 10 18062746 18067939 ECH