Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01749 ATGGCTATAGAGCAGGAATTGTCCCTGGGGCAGAATACGAATAGCAACTCCAACCCAGTTGATGGCGGGGATGTTCGAGGGGAGGGTGGAGATGAGGGAGGGAAAGCGCCGAGACTGCCTCGGTGGACAAGACAAGAAATTTTGGTTCTGATACAGGGAAAGAGAGACGCTGAGAACAAGTTCAGGAGGGGTCGCACGGCGGGATTGCCATTCGGGTCGGGTCAGGTGGAGCCCAAATGGGCATCAGTTTCTTCCTACTGCAGAAAGCACGGAGTCAACAGAGGTCCGGTTCAGTGCCGGAAAAGGTGGAGCAATTTAGCCGGAGACTATAAGAAGATCAAAGAATGGGAGTCTCAGATAACGGAGGAGACAGATTCCTTTTGGGTCATGAGAAACGATTTAAGGAGAGACAGGAAATTGCCCGGATTTTTCGACAAGGAGGTCTATGATATTCTCGATTCAGGCTCCCAGGCGCCGGCGTTGTCTCTCGCTCTTTCGTCGCCTCTATCAACCACAGTAACGGTGTGCAAGGACATGGACATGAACAACCCGGACCCGGACCCTGACGCTGCCCCTACCCCCGCTCCTGCCGAGCCTGAGGAGCCTCATCTCTACAATAATCGAAGTGCGCCTGTTGAGGATGGCTTGTTCTCAGATTTCGAACAAGATGAGGTCGCGGCCAGTCCTGAGAAGAAGGATGTTTTGCCGCCTTCCAAAAGGGACATTCCTGCCCCATTTCCTATCTCAGGTTCAAATTTCATTCCACTCCATGTTATCTAA 780 0.5231 MAIEQELSLGQNTNSNSNPVDGGDVRGEGGDEGGKAPRLPRWTRQEILVLIQGKRDAENKFRRGRTAGLPFGSGQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQITEETDSFWVMRNDLRRDRKLPGFFDKEVYDILDSGSQAPALSLALSSPLSTTVTVCKDMDMNNPDPDPDAAPTPAPAEPEEPHLYNNRSAPVEDGLFSDFEQDEVAASPEKKDVLPPSKRDIPAPFPISGSNFIPLHVI 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01749 259 MobiDBLite consensus disorder prediction 1 21 - -
Spst10g01749 259 ProSiteProfiles Myb-like domain profile. 41 107 IPR001005 -
Spst10g01749 259 MobiDBLite consensus disorder prediction 25 39 - -
Spst10g01749 259 MobiDBLite consensus disorder prediction 224 238 - -
Spst10g01749 259 MobiDBLite consensus disorder prediction 177 243 - -
Spst10g01749 259 Pfam Myb/SANT-like DNA-binding domain 41 130 IPR044822 -
Spst10g01749 259 Gene3D - 42 112 - -
Spst10g01749 259 MobiDBLite consensus disorder prediction 1 39 - -
Spst10g01749 259 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 11 253 - -
Spst10g01749 259 CDD GT1 40 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01749 Spst-Chr10 17878692 17879471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01749 20 115 Trihelix Transcription Factor Family AT1G76890 26.042 3.57e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst10g01749 Myb_DNA-bind_4 6.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01749 - - gmx:100797767 318.546