Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01743 ATGGTTAATTCATGCGTTTGTTGGGCGGAAAAACACCACATTGGAGCTATTTTGGTGGAGCTGCCTCCCTCACCCTGTGTTGACCGCAGACCCAAACATGGCATTCCGGAAGACGAGAAGCTCAATCCCAATCCTCACCAGGAAAACCATCATCATCACGATCATGATCTTAAGCCCCCAATCCCCCCTCGTATTTCCAGACTTCCCTCTGCCTCCGGAGCAGACAAGCTACGGTCATCAAGTAATGGTAATGGTAATAGCAATGGCAATGGTAATAATGGTGACTCCAAAAGGGAATTGGCTGCTCTCAAGGACGGGCCTGCTGTACAAATTGCCGCACAAACTTTCACATTCCGTGAGCTGGCAGCCGCAACCAAAAACTTCAGGCCCCAATCCTTTCTGGGGGAAGGTGGTTTCGGAAGGGTCTACAAGGGCCGCCTTGAAACCACGGGCCAGGCTGTGGCTGTTAAACAGTTAGACAGAAACGGTCTTCAGGGTAACCGAGAATTCCTCGTCGAGGTTCTCATGCTCAGTCTTCTACATCACCCTAATCTTGTCAATCTCATTGGTTACTGTGCGGATGGGGACCAACGCCTCTTAGTTTATGAATTTATGCCGTTGGGATCATTGGAAGACCACCTTCATGAAGCTATGGAAAAGGAATGTGATACATATGATGAAGTGATAAACATTCTATTGTCTGCTGGAAATGTTTCCACTTTGCCTTATCTTCCCCGGGATAAGGAACCATTGGATTGGAACACCAGGATGAAAATAGCTGCGGGGGCAGCAAAAGGATTGGAGTACCTTCACGACAAAGCAAATCCTCCTGTCATTTATAGAGATTTCAAATCGTCTAATATATTACTTGATGAAGATTATCACCCAAAGCTTTCAGACTTTGGTCTTGCAAAGCTCGGTCCCGTTGGTGACAAATCACACGTTTCCACCCGTGTCATGGGAACTTATGGTTACTGTGCCCCAGAATATGCTATGACTGGACAGCTGACTGTGAAGTCTGATGTATATAGTTTTGGGGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCTATTGACAGCACCCGACCCCATGGAGAACAAAACCTCGTCACATGGGGTGGTAATGGTAATGGTAATGGTGATTTTATATACATGTTGGAACAGGCACGTCCATTGTTCAATGACCGCAGGAAGTTTCCAAAGTTAGCAGATCCGGAGCTGCAGGGACGGTATCCCATGCGGGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAACAGGCGGCGGCGCGTCCTCTCATTGGGGATGTGGTGACAGCCCTTTCTTTTCTAGCCAACCAGGCATATGACCATAGGGGAGGTGGTGATGATAAAAGGAACAGAGATGATCAAGGTGGAAGAATATTGAAAAATGACCAAGGTGAAGGATCTGGACGGAGATGGGATTTGGAAGGATGTGAGAAAGATGAGTCCCCACGTGAAACTGCAAGGATGTTAAACAACAGGGATCTTGATAGAGAACGTGCGGTGGCTGAAGCCAAGATGTGGGGAGAGAATTGGAGAGAGAAAAGACGACAAAGTGCGCAGGGCAGTTTTGATGGTTCTAACGCCTAG 1626 0.4754 MVNSCVCWAEKHHIGAILVELPPSPCVDRRPKHGIPEDEKLNPNPHQENHHHHDHDLKPPIPPRISRLPSASGADKLRSSSNGNGNSNGNGNNGDSKRELAALKDGPAVQIAAQTFTFRELAAATKNFRPQSFLGEGGFGRVYKGRLETTGQAVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHEAMEKECDTYDEVINILLSAGNVSTLPYLPRDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEDYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWGGNGNGNGDFIYMLEQARPLFNDRRKFPKLADPELQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSFLANQAYDHRGGGDDKRNRDDQGGRILKNDQGEGSGRRWDLEGCEKDESPRETARMLNNRDLDRERAVAEAKMWGENWREKRRQSAQGSFDGSNA 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01743 541 PANTHER OS07G0668900 PROTEIN 89 456 - -
Spst10g01743 541 MobiDBLite consensus disorder prediction 26 61 - -
Spst10g01743 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Spst10g01743 541 MobiDBLite consensus disorder prediction 22 98 - -
Spst10g01743 541 ProSitePatterns Protein kinases ATP-binding region signature. 134 157 IPR017441 GO:0005524
Spst10g01743 541 Gene3D Phosphorylase Kinase; domain 1 112 204 - -
Spst10g01743 541 FunFam Serine/threonine-protein kinase PBS1 233 463 - -
Spst10g01743 541 MobiDBLite consensus disorder prediction 453 541 - -
Spst10g01743 541 SUPERFAMILY Protein kinase-like (PK-like) 114 451 IPR011009 -
Spst10g01743 541 ProSiteProfiles Protein kinase domain profile. 128 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01743 541 FunFam Serine/threonine-protein kinase PBS1 101 204 - -
Spst10g01743 541 MobiDBLite consensus disorder prediction 73 95 - -
Spst10g01743 541 CDD STKc_IRAK 134 445 - -
Spst10g01743 541 MobiDBLite consensus disorder prediction 455 532 - -
Spst10g01743 541 Pfam Protein tyrosine and serine/threonine kinase 132 359 IPR001245 GO:0004672|GO:0006468
Spst10g01743 541 Gene3D Transferase(Phosphotransferase) domain 1 205 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01743 Spst-Chr10 17838994 17844916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01743 71 529 Glycoside Hydrolase AT3G07070 54.031 1.34e-156 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Spst10g01743 PK_Tyr_Ser-Thr 8.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01743 K13430 - gmx:100777987 761.14