Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01742 ATGGAGATGTCACCAGAAAACAATGATGTGGACGTGGATGTTGGGAGAAGGGAAGATACAAAGGAGGAGGTGGAACTGTTGGAGCGTATGGTGGATAGGTACTTCAGCGGGAAGGTTGGGGAGGATGATGAGGGAGAAGAAGAGGACAAGTCCTTATTGCTCTTCCTAGATGCGGTTGATCGCATCTCCAAACTCTCCACCTCAACTGTTATTTCCTCCGACGAGTTTGACCAAATTAATCTCGTTCTTGAAAAAGCAATGTTCCTGTTAGAGAAACGTCTTTCTTCTCTTCTAGATCAGGAACCCAAATCCAAACCATCCAACAAATCCTTCTCCTTTCGTTCTCGTTCTCGTTCTCACCTCTCTTCCATTTACGAGACCCAATCCCCTAGGCCAACCCAACAGTATCAACAAACCCAAGACCCTTTTAATTACTCTCCACAAAGGATTTCCACTTTGAACAAGATCTCCACTGCCATGATCGCCGCCGGCTACCACATCGAGTGCTGCATGGCTTTTGCCTATTTCAGGCGGAGTGCTTTCAAAAATACACTCCAGACATTTGGATACGGGAACACCAAAATGGAAGATCTGTATAAAATGCCATGGGAATCGCTTGAAGGCGAAATTACATCGTGGAATCAAGTGGTTTGGCATTGCACCACCGTGCTTTTCAGCGCTGAACGAAGCCTTTATGAATCCATCTTCCCCAATCAACCCTCTATAGTTCAAAACTTGTTCTCCGATCTTGCACGACATGTCATCATCCATTTGCTCGATTTTGCACAAGGTGCTGTTCTAACGAAATGGACCACGGAGAAACTATTCAAATTCCTTGATATGTACGAGACCCTGAGGGAAGACGTTGTCCAGGGTTCCTATCTGGAGTCGTGCGAAAAGGAGCTGGCGTATGAGATAAACACGGCAAAAGAGAGGATAGTAGAGGCTATCGTGGCCATGTTTGGTGATTTGAAGAACTCCATCGAGAACGACAACGAAAGGATTCCTGTTCCGAACGGTGCAGTGCACCCATTGACTCGTTATGTCATGAACTATCTAAAATATGCATGCGAGTACAAGAAAACGTTGGAGCACGTGTTTGAGCAAGGAGAAGGTGAAATGAGGAATGGGAATGAGAAATGTATGGAGGTGGATGAAGCGGAAGATGTAGAGACGCCGAAGAATTCGGGGTTTGCAGTTGAATTGATGAGCATAATGGAGCTTTTGGATGCAAATGTGGAAAGGAAATCAAAGTTGTACAAGGATAATGCTTTGAGGTATTTTTTTCTGATGAACAACGGGAGATACATAGTGCAGAAGGTGAAAGGGTGTAGGGAGCTTAATGAGTTGATGGGTAACAATTGGTGCAGGAGGAGGCAATCGAGTCTGAGACATTACCACAAGAATTATCAGAGGGAAACGTGGAGTAAGGTGTTGGATTGCCTCAAACCAGAGGGGCTTCAGGGGAGTAGGAACAAGGTGTCCAAACAGCTTGTGAAAGAAAGGTTCAAATGCTTCAATGGGATGTTTGAAGAGATACACAAGTGCCAGAGCAGTTGGATGGTAAGCGACAACCAACTCCAGTCCGAACTCAGGGTTTCCATCTCCGCCTTGGTCATCCCTGCTTACCGCTCTTTCCTTGGAAGATTTAAACAGCATCTTGAATCAACCAGACATATTGACAAGTACATTAAATACCATCCCGAAGACATCGAGGTTTTGATCGATGATTTGTTTGCTGGTAATGTTGGCTCCATGTCTCGTAGGAGGACATGA 1776 0.4521 MEMSPENNDVDVDVGRREDTKEEVELLERMVDRYFSGKVGEDDEGEEEDKSLLLFLDAVDRISKLSTSTVISSDEFDQINLVLEKAMFLLEKRLSSLLDQEPKSKPSNKSFSFRSRSRSHLSSIYETQSPRPTQQYQQTQDPFNYSPQRISTLNKISTAMIAAGYHIECCMAFAYFRRSAFKNTLQTFGYGNTKMEDLYKMPWESLEGEITSWNQVVWHCTTVLFSAERSLYESIFPNQPSIVQNLFSDLARHVIIHLLDFAQGAVLTKWTTEKLFKFLDMYETLREDVVQGSYLESCEKELAYEINTAKERIVEAIVAMFGDLKNSIENDNERIPVPNGAVHPLTRYVMNYLKYACEYKKTLEHVFEQGEGEMRNGNEKCMEVDEAEDVETPKNSGFAVELMSIMELLDANVERKSKLYKDNALRYFFLMNNGRYIVQKVKGCRELNELMGNNWCRRRQSSLRHYHKNYQRETWSKVLDCLKPEGLQGSRNKVSKQLVKERFKCFNGMFEEIHKCQSSWMVSDNQLQSELRVSISALVIPAYRSFLGRFKQHLESTRHIDKYIKYHPEDIEVLIDDLFAGNVGSMSRRRT 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01742 591 MobiDBLite consensus disorder prediction 123 145 - -
Spst10g01742 591 PANTHER EXOCYST COMPLEX PROTEIN EXO70 47 581 IPR004140 GO:0000145|GO:0006887
Spst10g01742 591 SUPERFAMILY Cullin repeat-like 54 579 IPR016159 -
Spst10g01742 591 Pfam Exo70 exocyst complex subunit 212 576 IPR046364 GO:0000145|GO:0005546|GO:0006887
Spst10g01742 591 Gene3D Exocyst complex component Exo70 39 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01742 Spst-Chr10 17837203 17838978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01742 25 590 EXO70 exocyst subunit family AT5G13150 48.969 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01742 K07195 - pvu:PHAVU_007G000900g 838.18