Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01737 ATGGGGTCGTGCCTCTCGGTCTCGGGGGCATCATCGGCGTCCACAGATGAATGTGATGAACAAGAATCGACTCGCACGGCATTCTCGGATTATAGAACCGAAATGCGGGTCCACAGAGTTCCTGGGAGATTGTTCTTGAATGGTTCGTCGCAGGTTGCTTCCTTGTACTGTAGGCAAGGGTGCAAAGGGATGAACCAGGATGCGATGCTTCTGTGGGAGAATTTCTGTTCAAACCCAGACAGCGTTTTGTGCGGTATTTTTGATGGGCACGGACCTTATGGCCATTTGATTGCAAAGAAACTCAGAGATTCGTTTCCTTTGAAGCTCATTGATCAATGGAATTCCCCAAGCCCTGACTACACCACCAACCGCTATCGCAATCATTTTAGCACATTGTCTAATAACTTCAAACCTGATACCACTGCCCCAACTAACATTGCTACGCTCAGAGAATCTTTTGTCAACGCTTCAAAGATCATGGACAGAGAACTCAAACTCAACGACCAAATTGATTGCTCCACCAGTGGCTCCACGGCTGTTACCTTGCTGAAGCAGGGCCACGACCTCGTTATTGCTAATGTCGGTGACTCCAGAGCTGTACTGGCTACCAGAGATCGTAATGGTTCCCTTCTTGCCGTTCAGATTACCACTGACCTTAAGCCAGATCTTCCAAGGGAAGCAGAGAGGATAAGGCTTTGTAAGGGAAGGGTGTTTGGCCTTAAAAATGAACCTGGGATTGCTAGAGTGTGGCTGCCCCATACCAATTCCCCTGGGCTTGCCATGTCAAGGGCCTTTGGAGATTTTTGTCTCAAGGACTTTGGAGTCATCTCTGTTCCTGATTTCTCCTATCACCGCGTCACTCACAGGGATCAATTTGTGGTGTTAGCCTCAGATGGGGTATGGGATGTTTTATCAAACGAAGAAGTTGTGTCCATTGTGGCATTTTCTCCACGCCCTACAGCGGCTCGAACACTGGTTGATGCAGCTGTTCAGGCATGGAAAACGAAGCTCCCCAGTTCCAAGGTTGATGATTGCTCTGCAGTTTGCCTCTTCCTTAATTGGGAGTCGGACTCCGACGTAAAATCATCGCCATCATCTATAAACACATACCCATCAAATGTGGTTCAGCAGTCACCACCACTACTTCGAGTGGAATCTGAACGACAGTGCCGATAG 1176 0.4838 MGSCLSVSGASSASTDECDEQESTRTAFSDYRTEMRVHRVPGRLFLNGSSQVASLYCRQGCKGMNQDAMLLWENFCSNPDSVLCGIFDGHGPYGHLIAKKLRDSFPLKLIDQWNSPSPDYTTNRYRNHFSTLSNNFKPDTTAPTNIATLRESFVNASKIMDRELKLNDQIDCSTSGSTAVTLLKQGHDLVIANVGDSRAVLATRDRNGSLLAVQITTDLKPDLPREAERIRLCKGRVFGLKNEPGIARVWLPHTNSPGLAMSRAFGDFCLKDFGVISVPDFSYHRVTHRDQFVVLASDGVWDVLSNEEVVSIVAFSPRPTAARTLVDAAVQAWKTKLPSSKVDDCSAVCLFLNWESDSDVKSSPSSINTYPSNVVQQSPPLLRVESERQCR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01737 391 ProSiteProfiles PPM-type phosphatase domain profile. 49 352 IPR001932 -
Spst10g01737 391 SMART PP2C_4 43 350 IPR001932 -
Spst10g01737 391 MobiDBLite consensus disorder prediction 1 17 - -
Spst10g01737 391 CDD PP2Cc 51 352 IPR001932 -
Spst10g01737 391 Pfam Protein phosphatase 2C 124 314 IPR001932 -
Spst10g01737 391 PANTHER PROTEIN PHOSPHATASE 30 350 IPR015655 GO:0004722|GO:0006470
Spst10g01737 391 MobiDBLite consensus disorder prediction 1 23 - -
Spst10g01737 391 SUPERFAMILY PP2C-like 48 354 IPR036457 -
Spst10g01737 391 Gene3D - 47 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01737 Spst-Chr10 17789525 17790956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01737 37 353 PP2C-type Phosphatase Gene Family AT1G16220 54.711 4.90e-132 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01737 - - gmx:100816114 499.975