Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01719 ATGAAAGCTTCGCGGAGAGCCAATGGCAATGGCGATGCTCCCGTGGAAGGTGCGAAGAATGTAGCGGTGAGCGAGCAGAACCCCGCTACTCGCAGGGTCATACGTTCCCAGTTCCTCAAACTCAAGAATCTCATCAACGACAAAAAGGATGATTTGATTAACACGGAGTCCGACAAGTTCGACACCATTTTGGATGAGTTCGACAAGTTACACGACCAAGTGATTGACGCGGTTGGATGGAATTTTGCAGTTGAGAAGCCGAGAGAGCAGGTTGCAGATGCAGAGGCACTGTTGGATCTCACACGCACTCTGTTAGGATCTGTTAGGTCTTTGGCGAACGAAGGTATCACCCCTTCGCAATTTGTTTCCTCTTTGCTCATACGCTATGGCCAAGGCCAAGACTCAATCGACTGGCAGAAGCTTGGCCTTGCCGTGTCCCCAATCTTTCTCTCCGTTCATGGCTCTTCTACCATGCTTGGTCCTATGGACAAGGAGTTCAAGCAACGAAAAACCGGAGTGCGCAAAAACCGTGAACCTCGCCCAATTGCAACTACTAGACCTGAACAGCTTGATGAGACTGGTACAGAGGAAAAAACTGATACTGACAAAAACATGGCGACTATGTTTGACATCTTGAGGAGGAGAAAGCGTGTCCGACTTGAATACTTAGTTATGAATAGAAAGTCTTTTGCTCAAACTGTGGAAAACTTGTTTTCTCTATCATTCCTAGTGAAAGATGGTCGTGCTGAGATCAGTCTAGATGAAAATCGTTTGCATTATGTTGCTCCTAAAAATGCTCCAGCTGCCAACTTGGTATCATCAAAAGAAGTTTCTTACACCCACTTTGTATTCAGATATGATTACCAAGATTGGAAGGTAAACGGGTACAATGCTTGTAAACTTATGAAAGATGTGGTGCCTGAAGGGAAAGAGTTGATGCCACATCGGATTCAATGTTCCACTGAGTCTCAGGAAAGGATGGGTGTTGACAATTCCCAACCTGCTTTAGCTTTAACACCTATAAGGAAGCTATCGCGGAATCGAGGACTGGTTGTGCAGGAAGAAAGTGTTGTGGAAGAATCTCCTGAATGTGACGAAGAAAATGCTTCCAGAGCAGGGGCTATTCGTAGGTGTAAGCGTAAACTTCATTAA 1152 0.4557 MKASRRANGNGDAPVEGAKNVAVSEQNPATRRVIRSQFLKLKNLINDKKDDLINTESDKFDTILDEFDKLHDQVIDAVGWNFAVEKPREQVADAEALLDLTRTLLGSVRSLANEGITPSQFVSSLLIRYGQGQDSIDWQKLGLAVSPIFLSVHGSSTMLGPMDKEFKQRKTGVRKNREPRPIATTRPEQLDETGTEEKTDTDKNMATMFDILRRRKRVRLEYLVMNRKSFAQTVENLFSLSFLVKDGRAEISLDENRLHYVAPKNAPAANLVSSKEVSYTHFVFRYDYQDWKVNGYNACKLMKDVVPEGKELMPHRIQCSTESQERMGVDNSQPALALTPIRKLSRNRGLVVQEESVVEESPECDEENASRAGAIRRCKRKLH 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01719 383 PANTHER UNCHARACTERIZED 12 367 IPR027786 GO:0005634|GO:0006281|GO:0030915
Spst10g01719 383 MobiDBLite consensus disorder prediction 168 198 - -
Spst10g01719 383 MobiDBLite consensus disorder prediction 1 24 - -
Spst10g01719 383 Pfam Nse4 C-terminal 218 292 IPR014854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01719 Spst-Chr10 17620416 17622553 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01719 31 382 Non-SMC Element family AT1G51130 49.591 3.46e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01719 K22825 - gmx:100792117 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01719 10 17620416 17622553 Spst10g01719 10 17620416 17622553 ECH