Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01714 ATGAGTGTTAATACTGTTCTTATTTGTCTTACCTCTGTTATCCTTCTCCCCTTGTTGCAACTCCCATACGTCTCTGCCTCTGCTACGCCGCACAATAATGTTAGCATTGGTGAGACCCTTATTGCAGGTAATGAGGGTGCGCAATGGCTTTCTCCATCAGGAGAGTTTGCATTTGGTTTTCATCTGCCTGAGAATAATACCCTTTTCTTGCTTGCCATAAGGTACCAAAATATACCTCATGCCTCTTTCATTTGGTATGCAAATGGAGACAACCTTGCTCCTAAAGGCTCAAAACTTGAGCTTAGTGAAGACAGTGGGCTGGTGCTGAAATCCCCTCAGGGTGTTCAGCTATGGACATCACAGCCCATATCAGGTACAATTTCCTATGGACTACTGAATGACACAGGCAACTTCCAGCTTCTAGATGAGAATTCACAGATGTTGTGGGACAGTTTCAGCAATCCAACTGATACCTTGGTGCCATCTCAAATCATGGAGATTGGAGGCACGCTTTCATCGCGCCACAAAGAGACCAACTTCTCACGGGGAAGGTTCCAGTTTCGCTTGATTACGGAGGGTACGGCTAAGCTTAATCCTATAAATTTACCTACCAACCATATTTATGATTCTTACTACATCAGTAGAACTGATGACTCGACCAATACAACAAACTCTGGTTTCCGAGTGATGTTTGATAATTCAGGATTTTATGTATTGAAGAGGAGCTATGAGAGGTTTTATATTACCAATCCAAATGATATGCTCTCAACCGATTCCTATTACTATAAAGCAACCATAAATTTTGATGGAACTTTCACCATATCACGTTACCCGAAAAATCCAGATTCAAATCCAAGCTGGACGGTTATAAAGACATTGCCAGACAACATTTGCATGGATTTGCGAGAAAGTAGGGGTGGTAGTGGGGTCTGTGGATTCAATAGTATCTGCACTCTCGAACCTGATCAAAGACCGAAGTGCACTTGTCCAGAAGGCTATTCTCTTCTTGATTCAACGGATGAGTATGGAAGCTGCAGACCAAATTTGGAACTCGGTTGCGGAGAAAGTGGACAAAACTTGCAAGAACATATGTACTTCATGAAGGAAATGGCGAGTACTGATTGGCCGGAATCAGATTATGAAGTGTATGAACCTTACAATTCAGAAGACTGCAAGACTTCTTGCTTGCAAGATTGCTTATGTGCTGTTTCTATTTTTAGAAGTGATAGCTGTTGGAAGAAGAAGCTGCCTCTATCCAATGGAAGACGGGATGGAGAAGTTGGGGGATCTGCTTTCATTAAGTTGAGGAAAAATGATGCTTCGCTAGCTAGTCCTTCAAATCCGTTCATAGAAGAGAAGGAAATTGGAAAGGATCAAGAAACATTGATAACTGTGATATCAGTCCTTCTAGGAAGTTCTGTCTTTGTGAATCTCATGGTGGTCAGTGCTGTATGTATTGGTTTCCACTTCTGTTACAACAAGAGAAGTTCTACCAATGATACTGTTGCGGGGAGCAATTTGCGCCGTTTCACCTTTAGAGAGATTGTGCAAGCAACAGATAACTTCAAAGAAGAATTGGGAAGGGGGTCTTGTGCCATTGTCTTTAAAGGAACAACAGATTTATCTACTATTGCGGTCAAGAAACTACACAAGGTGCTCAAAGAAAGCGATAAGGAATTCAAAACAGAAGTGAATGTGATAGGTCAAACTCATCACAAAAACTTGGTTCGCCTGATTGGATACTGTGATGAGGTAGAAAACCGGATTCTGGTGTATGAATTTTTGAGCAATGGCACCTTAGCAAATTTTCTTTTCGGGGATTTCAAACCAAATTGGAACCAAAGAGTCCAGATTGCTTTTGGGATATCAAGAGGGCTGGTTTACTTGCACGAGGAATGCTGCACCCAGATCATCCATTGTGACATAAAGCCTCAAAATATACTTCTAGATGAGTATTACAATGCAAGAATATCAGATTTTGGGTTGTCAAAGCTGCTAATGATTAATCAAAGCCGCACAGAAACTGACATTCGAGGAACAAAAGGGTATGTTGCACCAGACTGGTTCAGGAGTGCACCAATCACAGCCAAGGTTGATGTCTACAGTTTTGGTGTGCTGCTTCTGGAGATAATTTGTTGCAGGAAAAATGTAGATGGTGAATTGGAGAATGAAGAGAAGGCCATTTTAACTGACTGGGCCTGCGACTGCTATACGGCTGGAAGAATTGACATTCTGGTTGAAAATGATGAGGAGGCTATCAATGACATCAATAGGTTGGAAAGGTTTGTGATGATAGCTATTTGGTGCCTTCAAGAGGATCCCTCTCTCAGGCCAAGTATGAAGAAGGTGATGCTGATGCTGGAAGGAATAGCTCCAGTCACAATTCCACCTAGTCCCTGCCCATATGATACCTCTGTGGCTGTTAGTTGCGGTTGA 2436 0.4216 MSVNTVLICLTSVILLPLLQLPYVSASATPHNNVSIGETLIAGNEGAQWLSPSGEFAFGFHLPENNTLFLLAIRYQNIPHASFIWYANGDNLAPKGSKLELSEDSGLVLKSPQGVQLWTSQPISGTISYGLLNDTGNFQLLDENSQMLWDSFSNPTDTLVPSQIMEIGGTLSSRHKETNFSRGRFQFRLITEGTAKLNPINLPTNHIYDSYYISRTDDSTNTTNSGFRVMFDNSGFYVLKRSYERFYITNPNDMLSTDSYYYKATINFDGTFTISRYPKNPDSNPSWTVIKTLPDNICMDLRESRGGSGVCGFNSICTLEPDQRPKCTCPEGYSLLDSTDEYGSCRPNLELGCGESGQNLQEHMYFMKEMASTDWPESDYEVYEPYNSEDCKTSCLQDCLCAVSIFRSDSCWKKKLPLSNGRRDGEVGGSAFIKLRKNDASLASPSNPFIEEKEIGKDQETLITVISVLLGSSVFVNLMVVSAVCIGFHFCYNKRSSTNDTVAGSNLRRFTFREIVQATDNFKEELGRGSCAIVFKGTTDLSTIAVKKLHKVLKESDKEFKTEVNVIGQTHHKNLVRLIGYCDEVENRILVYEFLSNGTLANFLFGDFKPNWNQRVQIAFGISRGLVYLHEECCTQIIHCDIKPQNILLDEYYNARISDFGLSKLLMINQSRTETDIRGTKGYVAPDWFRSAPITAKVDVYSFGVLLLEIICCRKNVDGELENEEKAILTDWACDCYTAGRIDILVENDEEAINDINRLERFVMIAIWCLQEDPSLRPSMKKVMLMLEGIAPVTIPPSPCPYDTSVAVSCG 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01714 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 794 - -
Spst10g01714 811 Gene3D Transferase(Phosphotransferase) domain 1 595 794 - -
Spst10g01714 811 Pfam Protein kinase domain 523 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01714 811 Gene3D - 31 154 IPR036426 -
Spst10g01714 811 ProSiteProfiles Protein kinase domain profile. 520 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01714 811 PIRSF SRK 3 809 IPR024171 GO:0004674
Spst10g01714 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Spst10g01714 811 SMART blect_4 31 155 IPR001480 -
Spst10g01714 811 Pfam D-mannose binding lectin 84 168 IPR001480 -
Spst10g01714 811 FunFam Serine/threonine-protein kinase 156 301 - -
Spst10g01714 811 SUPERFAMILY Protein kinase-like (PK-like) 499 788 IPR011009 -
Spst10g01714 811 ProSiteProfiles Bulb-type lectin domain profile. 25 153 IPR001480 -
Spst10g01714 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 157 IPR036426 -
Spst10g01714 811 FunFam S-receptor-like serine/threonine-protein kinase 491 594 - -
Spst10g01714 811 SMART serkin_6 520 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01714 811 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 40 800 - -
Spst10g01714 811 Gene3D Phosphorylase Kinase; domain 1 492 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01714 Spst-Chr10 17587532 17589967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01714 502 789 Receptor kinase-like Gene Family AT1G60800 41.216 3.16e-67 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst10g01714 Pkinase 6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01714 - - vra:106771503 1366.67