Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01704 ATGGACCGCAGAGACTTCCACCACCGTCCTGCTCATTTGGCACATGCTTCTCCTCCTGATTACTTCGTCCGCCAGGGGAATACAACTTACCAAGACGATCTATATTTGAGGAAGAGGACCAGGATGCGTCGGTGGCTTTGCTGCACTTGTCAGGTGGAAGAGTCTTACCCATCAAACGAACATGAACACCTGAAAAGTCCAAGAAATTATGGAGAAAGCAACCATAAAGGCTCAAAGGTGTCAACTCCTGTCAAGTCTGAAACAAATAAGGCACCACCACCTATTGAGGCTCCAGCCCTATCTTTAGATGAGCTAAAGGAAAAGACTGACAACTTTGGCTCAAAGGCATTAATTGGTGAAGGATCGTATGGAAGGGTGTATTATGCAACCTTAAACAGTGGACAAGCAGTGGCTGTGAAAAAGCTTGACGTTTCATCTGAACCCGAATCAAACAATGAGTTTTTGACCCAGGTTTCCATGGTGTCAAGATTGAAGAATGAAAATTTTGTTGAGTTGCACGGTTACTGTGTTGAAGGAAATCTTCGTGTCCTTGCATATGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCACGGTAGAAAGGGAGTTCAAGGTGCACAACCAGGGCCAACTCTTGATTGGATACAGCGAGTTAGAATTGCAGTTGATGCAGCTAGAGGATTGGAGTATTTACATGAGAAAGTTCAGCCACCGATAATACACAGAGATATCAGATCAAGTAACGTGCTAATCTTTGAAGATTACAAGGCTAAGATAGCCGACTTTAACCTATCTAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCAACTCGTGTATTGGGAACTTTTGGGTATCATGCTCCCGAGTATGCAATGACTGGGCAGTTGACTCAAAAAAGTGATGTCTATAGTTTCGGTGTTGTTCTTCTTGAGCTTCTTACAGGAAGAAAACCTGTTGACCACACCATGCCTCGGGGACAGCAGAGTCTTGTCACATGGGCTACGCCACGATTAAGTGAAGATAAAGTGAAACAGTGCGTAGACCCAAAACTGAAGGGAGAATACCCCCCCAAAGGAGTTGCTAAGCTTGCAGCTGTTGCAGCACTGTGCGTGCAGTATGAAGCTGAATTCAGGCCAAATATGAGCATTGTTGTTAAAGCACTCCAACCACTTCTGAAGTCTCCAGCTCCTGCTCCAGAAAGTTGA 1212 0.4505 MDRRDFHHRPAHLAHASPPDYFVRQGNTTYQDDLYLRKRTRMRRWLCCTCQVEESYPSNEHEHLKSPRNYGESNHKGSKVSTPVKSETNKAPPPIEAPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNSGQAVAVKKLDVSSEPESNNEFLTQVSMVSRLKNENFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPPIIHRDIRSSNVLIFEDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKSPAPAPES 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01704 403 SMART tyrkin_6 112 390 IPR020635 GO:0004713|GO:0006468
Spst10g01704 403 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Spst10g01704 403 Gene3D Phosphorylase Kinase; domain 1 74 188 - -
Spst10g01704 403 MobiDBLite consensus disorder prediction 1 20 - -
Spst10g01704 403 ProSiteProfiles Protein kinase domain profile. 112 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01704 403 Pfam Protein tyrosine and serine/threonine kinase 117 390 IPR001245 GO:0004672|GO:0006468
Spst10g01704 403 FunFam PTI1-like tyrosine-protein kinase 3 74 188 - -
Spst10g01704 403 SUPERFAMILY Protein kinase-like (PK-like) 90 390 IPR011009 -
Spst10g01704 403 MobiDBLite consensus disorder prediction 57 96 - -
Spst10g01704 403 FunFam PTI1-like tyrosine-protein kinase 3 190 400 - -
Spst10g01704 403 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 45 398 - -
Spst10g01704 403 MobiDBLite consensus disorder prediction 57 72 - -
Spst10g01704 403 MobiDBLite consensus disorder prediction 73 88 - -
Spst10g01704 403 ProSitePatterns Tyrosine protein kinases specific active-site signature. 240 252 IPR008266 GO:0004672|GO:0006468
Spst10g01704 403 Gene3D Transferase(Phosphotransferase) domain 1 190 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01704 Spst-Chr10 17496066 17499893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01704 46 391 Receptor kinase-like Gene Family AT4G02010 46.132 1.01e-92 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Spst10g01704 PK_Tyr_Ser-Thr 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01704 K13436 - mnt:21407434 698.738