Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01699 ATGGACCTTAACTCTCCTCTCTCTGGTTCCAACCGTTCCAACGCCATCGTCCTGATGGGGTATGGCCAACTAGGGTTGAACCGGAGAATGAATGAGCTAAGAATATCAATGGAGAGAACAACAAAAGGCTCGTGGGCTCATGTTTATCCCAGGGAAAAAGTGAGTGTAGTTGAGTCACCCCTTGTTACCAACGTGAAAGCAAGTGACTGGCTGAAAGCTGAGCTTCTCCGTGTGCCAGGGTTAGCCCCTAAGAACATGTTTTTCGGTAACATGCAGAGTGCACAACCCGCACCACCACTTAGGCATGAGTTAATTCTTCTGGGCGAACCGATTCGTTTTGTGAACCATTTTGGCTTTGAAAGCCAAGAATGGGCTCTGCAGAAGCCAAGAGAAGCAGTGAATGAGGTGAAGAGTGGTTCTGGAAATGAAGTGTTCGAGAAATATGATGGTCGAATCCATAGCTATAGGCACAAGAAGAATGGGCCATACACGTGCCCAAAGTGTATGGGCGTATATGCTACGTCCCAACGGTTTGCAGCGCATGTAAGTTCGCTCCACTACAAGTTTGAGTCGAGAAGTGAGAGAACGAAGAGGTTGATGGCCAGATTCCGAAAGCGAAACAAGCTTATTGAATGGGTTAATGGTAAACCTGGTTTTGTTCCTGGGGTTCCTTTGGGAAACATTGCTCCAAACGTTGCTTTCGGAAACAGTGCTCCTAAGGTTGGTTTGGGACATAACAACAACAATGTTGTTGCTCCTCTTCCTCCTCTTCCTCCTGCTCTGAAGGTTAACGTTGTTGTGAAAGCTGAGTGTGATGATGAACTGAGTCCACCACCAGGATTTGAAAAAATCAGTGCTGCTAAGCCAGGGTTTCCTCTTCCTTTTTGA 888 0.4685 MDLNSPLSGSNRSNAIVLMGYGQLGLNRRMNELRISMERTTKGSWAHVYPREKVSVVESPLVTNVKASDWLKAELLRVPGLAPKNMFFGNMQSAQPAPPLRHELILLGEPIRFVNHFGFESQEWALQKPREAVNEVKSGSGNEVFEKYDGRIHSYRHKKNGPYTCPKCMGVYATSQRFAAHVSSLHYKFESRSERTKRLMARFRKRNKLIEWVNGKPGFVPGVPLGNIAPNVAFGNSAPKVGLGHNNNNVVAPLPPLPPALKVNVVVKAECDDELSPPPGFEKISAAKPGFPLPF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01699 295 ProSitePatterns Zinc finger C2H2 type domain signature. 165 186 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01699 Spst-Chr10 17451225 17452112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01699 139 211 C2H2 Transcription Factor Family AT5G22990 54.545 2.03e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01699 - - var:108325669 181.03