Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01698 ATGGCCATGAACTCTTCCAAGTCCAACAACTTTAGCACCCTATTTCCTCGCTCGGGTTCCAACCCCACCGTCCCAAAAAACGAAGCCTTAGCGGTGAAAGGGACGAGCCAACTTGGGTTGAGCCAAAAGGTAAAAAACCTGACAAAAACCTCATTGACCACAAACAGAAGGCCATTGATGTTCCATGATCGTGTTAATGCCGCTGAAAAAGAGAAGGGAAAAGGGGTTATGAGGGCTCAATTTTCGGGTCTGTCACCAACTTCATTGAGCGATGGTGGCGACACTGAGAGCATCTTAAGAGCGAGTCAGATAGTAAGAGCCAAACTGGAGCATGCAGTTTGCAATGCTGTTGCTGACACTCACACGGAAGAGAATAAGAAAGCCATGGAGATGCTGCAAGCAAAAATCCTCTCTGCGACAGCATTCGCTTCCAAAAGTGATGCTGTTGTTGGTGGCAGCACTTCGTCAACACAGCTCGCGATTATTGCAACACCCCAGAGGGGAAGCTTTCTGAACCATTTTGCTTATCCCATCCCCACCATTGGTGGCGACAACTCTAGAAATTCCCATTTCTCACTATCACAGCCAGACACTGAGGTTGATGAAAGCATCACCCTTTGTGCGAGTCCACTGAGTGTTTGTTTTCCCCACGAAAGCAGTTACGGGAGGCAGAAGATGAGAAACAGCAACGTGGGTGAAGCAGCAGCCGAGAATGTTTTTGGCAACGAGGATGAGAGCGAATACGATGGTCGGATGCACAGCAATCCGTACAAGAAGAACGGGCCATACACGTGTCCGAAGTGCGGGTGCATGTTTGAGACATCGCAGCGGTTTGCGGCGCATGTGAGTTCGAGGCACTACAGGTACGAGACCAAGAGTGAGAAGAAGAAGAGAATGATGGCCAAAATCCGAAGGAGGAATGTGCGTCTTGAATGGGAAAATGGTGCTCTCACTATTGTTGCTGACGATGCTCCCAGGAGTAGTAACAGTGCTTTTGGTTTTGCAGGAACCAACACCAACCTTGCTCCTCCTCATGCTGCTCCTGTTAAGCTCAAGAATGAAGGTGAGACTGGTGTGGGGCTTCAGCTTGCTCCTCCTCCTGGATGGGGAAGACCAGAAGCTGGAGGACTCAAAGTAAAATTGGAGCCACTAGACAATTGA 1161 0.4927 MAMNSSKSNNFSTLFPRSGSNPTVPKNEALAVKGTSQLGLSQKVKNLTKTSLTTNRRPLMFHDRVNAAEKEKGKGVMRAQFSGLSPTSLSDGGDTESILRASQIVRAKLEHAVCNAVADTHTEENKKAMEMLQAKILSATAFASKSDAVVGGSTSSTQLAIIATPQRGSFLNHFAYPIPTIGGDNSRNSHFSLSQPDTEVDESITLCASPLSVCFPHESSYGRQKMRNSNVGEAAAENVFGNEDESEYDGRMHSNPYKKNGPYTCPKCGCMFETSQRFAAHVSSRHYRYETKSEKKKRMMAKIRRRNVRLEWENGALTIVADDAPRSSNSAFGFAGTNTNLAPPHAAPVKLKNEGETGVGLQLAPPPGWGRPEAGGLKVKLEPLDN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01698 386 MobiDBLite consensus disorder prediction 1 26 - -
Spst10g01698 386 MobiDBLite consensus disorder prediction 1 25 - -
Spst10g01698 386 MobiDBLite consensus disorder prediction 357 386 - -
Spst10g01698 386 ProSitePatterns Zinc finger C2H2 type domain signature. 265 286 IPR013087 -
Spst10g01698 386 ProSiteProfiles Zinc finger C2H2 type domain profile. 263 291 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01698 Spst-Chr10 17439849 17441009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01698 216 324 C2H2 Transcription Factor Family AT5G22990 42.857 3.60e-22 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst10g01698 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01698 - - vun:114189574 523.472